Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6C1
Confidence29.09%DateThu Jan 5 11:02:47 GMT 2012
Rank277Aligned Residues97
% Identity9%Templatec3a2kB_
PDB info PDB header:ligase/rnaChain: B: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils complexed with trna
Resolution3.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10....... ..20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




......






























Query SS confidence 









. . . . . .































































Query Sequence  VSAAGGLANA. . . . . . AIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVT
Query Conservation        
   ......   
   
   


                        
   

              
 
 
 
Alig confidence 









......



















...








































Template Conservation 

 


 

  

 

            







...
   
      
        
                    
Template Sequence  VGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMF. . . RGRESEEEMEFVKRFCVERRILCETAQIDVPAFQRSAGLGA
Template Known Secondary structure 

SSTTT
B

TT...
TTT


TTTTT

S
Template Predicted Secondary structure 











...










Template SS confidence 















































































   23......30.........40.........50........ .60.........70.........80.........90.........
 
   82.......90.........100........
Predicted Secondary structure 



Query SS confidence 


























Query Sequence  EALEKSRDAFIDEMQRCEQLGLSLLNF
Query Conservation    
          
  
  

   
  
Alig confidence 








.
















Template Conservation 
  

  

.  
   
       
  
Template Sequence  QEAARICRY. RFFAELMEKHQAGYVAV
Template Known Secondary structure  .TTT


Template Predicted Secondary structure  .



Template SS confidence 


























   100........ .110.........120.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions