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Job DescriptionP0A6C1
Confidence41.80%DateThu Jan 5 11:02:47 GMT 2012
Rank213Aligned Residues102
% Identity18%Templatec2zidA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dextran glucosidase; PDBTitle: crystal structure of dextran glucosidase e236q complex with2 isomaltotriose
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30. ........40..... ....50.........60.........70.
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Query Sequence  GLANAAIRAAEIDATAFAL. . . . . FTKNQRQWRAAPLT. . . . . . . . TQTIDEFKAACEKYHYTSAQILPHDS. . . . . . . .
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Template Sequence  GITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHAWF
Template Known Secondary structure  TTT
S





TTTTSS
S
GGG

TTT


SB

TTS
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   32.......40.........50.........60.........70.........80.........90.........100.........110.
 
   72.......80.........90.........100..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YLINLGHPVTEALEKSRDAFIDEMQRCEQLG
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Template Sequence  IEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWI. . . . DKG
Template Known Secondary structure 
TTSGGGGGB
SS

S
B
TTSSBSTTTT
SS
TTS
BB
TT
....TTT
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   112.......120.........130.........140.........150.........160.........170.........180.... ...
 
   103......110........
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Query Sequence  LSLLNFHPGSHLMQIS
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Template Sequence  IGGFRMDVIDMIGKIP
Template Known Secondary structure 

TTGGGTT
BG
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   188.190.........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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