Job Description P0A6C1 Confidence 100.00% Date Thu Jan 5 11:02:47 GMT 2012 Rank 14 Aligned Residues 261 % Identity 18% Template c2zdsB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:putative dna-binding protein; PDBTitle: crystal structure of sco6571 from streptomyces coelicolor2 a3(2) Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure													.	.																																.																												.	.	.	.	.	.	.	.
Query SS confidence													.	.																																.																												.	.	.	.	.	.	.	.
Query Sequence		K	Y	I	G	A	H	V	S	A	A	G	.	.	G	L	A	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	.	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	.	.	.	.	.	.	.	.
Query Conservation													.	.																																.																												.	.	.	.	.	.	.	.
Alig confidence													.	.																																.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	F	T	L	F	T	G	Q	W	A	D	L	P	L	E	E	V	C	R	L	A	R	D	F	G	Y	D	G	L	E	L	A	C	W	G	D	H	F	E	V	D	K	A	L	A	D	P	S	Y	V	D	S	R	H	Q	L	L	D	K	Y	G	L	K	C	W	A	I	S	N	H	L	V	G	Q	A	V	C	D	A
Template Known Secondary structure									G	G	G	T	T	S													T		S						S	S	T	T	T										T	T												T	T		B		S														S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
												71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	.	.	.	.	.	.	.	.	.	.	E	D	C	L	A	R	I	A	E	S	I
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	E	R	H	E	A	I	L	P	A	R	I	W	G	D	G	D	A	E	G	V	R	Q	R	A	A	A	E	I	K	D	T	A	R	A	A	A	R	L	G	V	D	T	V	I	G	F	T	G	S	A	I	W	H	L	V	A	X	F	P	P	A	P	E	S	X	I	E	R	G	Y	Q	D	F	A	D	R	W
Template Known Secondary structure		S		S							S						T	T																									T											S	S	G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		131	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		N	I	A	L	D	.	.	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G
Query Conservation							.	.
Alig confidence							.	.															.	.	.																																				.	.	.	.	.	.												.	.	.	.
Template Conservation																							.	.	.																																				.	.	.	.	.	.												.	.	.	.
Template Sequence		N	P	I	L	D	V	F	D	A	E	G	V	R	F	A	H	E	V	H	P	S	.	.	.	E	I	A	Y	D	Y	W	T	T	H	R	A	L	E	A	V	G	H	R	P	A	F	G	L	N	F	D	P	S	H	F	V	W	Q	D	.	.	.	.	.	.	L	D	P	V	G	F	L	W	D	F	R	.	.	.	.
Template Known Secondary structure												T									T	T	.	.	.	S	S			S											T	T	T		T	T							T							T	.	.	.	.	.	.										T	G	.	.	.	.
Template Predicted Secondary structure																							.	.	.																																				.	.	.	.	.	.												.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Query Sequence		F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	H	S	L	G	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	P	L	I	L	E	T	I	N	P	.	.	.	.	.	D	I	W
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.										.	.	.	.	.
Template Conservation		.																																																														.
Template Sequence		.	D	R	I	Y	H	V	D	C	K	E	A	R	K	R	L	D	G	R	N	G	R	L	G	S	H	L	P	W	G	D	P	R	R	G	W	D	F	V	S	A	G	H	G	D	V	P	W	E	D	V	F	R	X	L	R	S	I	D	Y	Q	G	.	P	V	S	V	E	W	E	D	A	G	X	D	R	L	Q	G	A
Template Known Secondary structure		.	G	G															S	S	S	B	T	T		T	T			T	T		T	T	B	S						T	T	S	S														T	T			S	.									T	T	S
Template Predicted Secondary structure		.																																																														.
Template SS confidence
			229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	E	I	A	W	L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	A	L	T	R	L	K	A
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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