Job Description P0A6C1 Confidence 95.66% Date Thu Jan 5 11:02:47 GMT 2012 Rank 47 Aligned Residues 230 % Identity 12% Template c2nx9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae Resolution 1.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R
Query Conservation
Alig confidence																																																																				.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.
Template Sequence		A	Q	Q	L	D	Q	I	G	Y	W	S	L	E	C	W	G	G	A	T	F	D	S	C	I	R	F	L	G	E	D	P	W	Q	R	L	R	L	L	K	Q	A	M	P	N	T	P	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	A	D	D	V	.	.	.	.	.	.	.	V	D	T	F	V	E	R
Template Known Secondary structure							T	S			S							T	T									T																T	T	S								G	G	G	T	T	S	S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	.	.	S	R	V	G
Query Conservation																																																																												.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																																														.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	K	N	G	M	D	V	F	R	V	F	D	A	M	N	D	.	.	.	.	.	.	.	.	.	.	.	.	V	R	N	M	Q	Q	A	L	Q	A	V	K	K	M	G	A	H	A	Q	G	T	L	C	Y	T	T	S	P	V	H	N	L	Q	T	W	V	D	V	A	Q	Q	L	A	E	L	G	V	D	S	I	A
Template Known Secondary structure						T									T	T			.	.	.	.	.	.	.	.	.	.	.	.															T													T	T																T	T		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	S	R	V	D	R	H	H	S	L	G	E	.	.	G	N	I	G	H
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence									.	.	.	.	.	.	.	.																					.	.											.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation									.	.	.	.	.	.	.	.																					.	.
Template Sequence		L	K	D	M	A	G	I	.	.	.	.	.	.	.	.	L	T	P	Y	A	A	E	E	L	V	S	T	L	K	K	Q	V	D	V	E	.	.	L	H	L	H	C	H	S	T	A	G	L	A	D	M	T	L	L	K	A	I	E	A	G	V	D	R	V	D	T	A	I	S	S	M	S	G	T	Y	G	H	P	A	T
Template Known Secondary structure					S	S	S		.	.	.	.	.	.	.	.																	S		S		.	.								T	T	S												T	T		S					B		G	G	G		S	T	T	S			B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		177	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		D	A	F	R	W	I	M	Q	D	D	R	F	D	.	G	I	P	L	I	L	E	T	I	N	P	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A
Query Conservation															.
Alig confidence															.			.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		E	S	L	V	A	T	L	Q	G	T	G	Y	D	T	G	L	.	.	.	.	.	.	.	D	I	A	K	L	E	Q	I	A	A	Y	F	R	D	V	R	K	K	Y	H
Template Known Secondary structure									T	T	S	T	T					.	.	.	.	.	.	.																		T	T	G
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions