Job Description P0A6C1 Confidence 99.67% Date Thu Jan 5 11:02:47 GMT 2012 Rank 39 Aligned Residues 245 % Identity 15% Template c2i56A_ PDB info PDB header:isomerase, metal-binding protein Chain: A: PDB Molecule:l-rhamnose isomerase; PDBTitle: crystal structure of l-rhamnose isomerase from pseudomonas2 stutzeri with l-rhamnose Resolution 1.97 Å

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		13	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.								.	.		.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																														.	.				.	.	.	.	.	.	.			.
Query SS confidence													.	.	.	.	.																																														.	.				.	.	.	.	.	.	.			.
Query Sequence		G	L	A	N	A	A	I	R	A	A	E	.	.	.	.	.	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	.	.	H	D	S	.	.	.	.	.	.	.	Y	L	.	I	N	L	G
Query Conservation													.	.	.	.	.																																														.	.				.	.	.	.	.	.	.			.
Alig confidence													.	.	.	.	.									.	.	.	.	.	.	.	.	.																													.	.				.	.	.	.	.	.	.			.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		G	I	F	D	K	L	D	D	C	A	V	I	Q	Q	L	T	R	A	T	P	N	V	S	L	.	.	.	.	.	.	.	.	.	H	I	P	W	D	K	A	D	P	K	E	L	K	A	R	G	D	A	L	G	L	G	F	D	A	M	N	S	N	T	F	S	D	A	P	G	Q	A	H	S	Y	K	Y	G	S	L	S
Template Known Secondary structure		S																S								.	.	.	.	.	.	.	.	.	B	T	T	T	T		S													T											S	S			T	T		S	S			T	T		S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																									.	.	.	.																							.
Query SS confidence																																									.	.	.	.																							.
Query Sequence		H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	Q	.	.	.	.	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	.	G	V	T	A	V	I	E	N	T	A	G	Q	G	S
Query Conservation																																									.	.	.	.																							.
Alig confidence																																				.					.	.	.	.																							.
Template Conservation																																				.
Template Sequence		H	T	N	A	A	T	R	A	Q	A	V	E	H	N	L	E	C	I	E	I	G	K	A	I	G	S	K	A	L	T	V	W	I	G	.	D	G	S	N	F	P	G	Q	S	N	F	T	R	A	F	E	R	Y	L	S	A	M	A	E	I	Y	K	G	L	P	D	D	W	K	L	F	S	E	H	K	M	Y	E	P	A
Template Known Secondary structure			S	S																						T										.				S	S	T	T	S	S																			T			T	T									S	S	S	S
Template Predicted Secondary structure																																				.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
					153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E	D	K	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	T	F	G	S	R	V	D
Query Conservation		.	.	.
Alig confidence		.	.	.																		.	.													.	.	.	.	.	.	.																.	.	.															.	.	.	.	.
Template Conservation																						.	.													.	.	.	.	.	.	.																.	.	.															.	.	.	.	.
Template Sequence		F	Y	S	T	V	V	Q	D	W	G	T	N	Y	L	I	A	Q	T	L	G	.	.	P	K	A	Q	C	L	V	D	L	G	H	H	.	.	.	.	.	.	.	A	P	N	T	N	I	E	M	I	V	A	R	L	I	Q	.	.	.	F	G	K	L	G	G	F	H	F	N	D	S	K	Y	.	.	.	.	.	G	D
Template Known Secondary structure		S	S			T	T		S													.	.	T	T							G	G	G	S	.	.	.	.	.	.	.		T	T													.	.	.	T	T									B		S	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																						.	.													.	.	.	.	.	.	.																.	.	.															.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.
		230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure												.																		.	.	.	.	.	.										.	.	.	.
Query SS confidence												.																		.	.	.	.	.	.										.	.	.	.
Query Sequence		R	H	H	S	L	G	E	G	N	I	.	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D	G	I	.	.	.	.	.	.	P	L	I	L	E	T	I	N	P	.	.	.	.	D	I	W	A	E	E	I	A	W	L	K	A	Q	Q	T	E	K	A	V
Query Conservation												.																		.	.	.	.	.	.										.	.	.	.
Alig confidence												.																		.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		D	D	L	D	A	G	A	I	E	P	Y	R	L	F	L	V	F	N	E	L	V	D	A	E	A	R	G	V	K	G	F	H	P	A	H	M	I	D	Q	S	H	N	V	T	D	P	I	E	S	L	I	N	S	A	N	E	I	R	R	A	Y	A	Q	A	L	L
Template Known Secondary structure				B		T	T	S	S																		T	T		T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions