Job Description P0A6C1 Confidence 96.22% Date Thu Jan 5 11:02:47 GMT 2012 Rank 46 Aligned Residues 206 % Identity 15% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	F	T	K	N	Q	R	Q	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A	C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M
Query Conservation
Alig confidence																																				.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	.	.	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	K	G	F
Template Known Secondary structure										T	T		S								S		T	T	T		G	G	G	T	T					.	.				S				T	T	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																				.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.																							.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.
Query Sequence		Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G	S	H	L	M	.	.	.	.	.	.	Q	I	S	E	E	D	C	L	A	R	I	A	E	S	I	N	I	A	L	D	K	T	Q	G	V	T	A	V	I	E	N	T	A	G	Q	G	S	N	L	G	F	K	F	E	H	L	A	A	I	I	D	G	V	E
Query Conservation																						.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q
Template Known Secondary structure							T	T										S										S	S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure				.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	.	.	S	R	V	G	V	C	I	D	T	C	H	A	F	A	A	G	Y	D	L	R	T	P	A	E	C	E	K	T	F	A	D	F	A	R	T	V	G	F	K	Y	L	R	G	M	H	L	N	D	A	K	S	.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	S	R	V	D	R	H	H	S	L	G
Query Conservation				.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.												.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.																							.
Template Sequence		Q	M	G	C	Y	E	V	S	L	G	D	T	I	G	V	.	.	.	.	.	.	.	.	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	.	A	G	H	F	H	D	T	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	V	F	D	S	S	V	A	G	L	G
Template Known Secondary structure			T	T		S							S	S	S		.	.	.	.	.	.	.	.														T	T	T	S		G	G	G		.					B		T	T	S												T	T							B	G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																							.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
										236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	E	G	N	I	G	H	D	A	F	R	W	I	M	Q	D	D	R	F	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	C	P	Y	A	K	G	A	T	G	N	V	A	S	E	D	V	L	Y	L	L	N	G	L	E	I	H
Template Known Secondary structure		B		G	G	G	T	T		B		B		B											T	T		B
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions