Job Description P0A6C1 Confidence 29.58% Date Thu Jan 5 11:02:47 GMT 2012 Rank 275 Aligned Residues 88 % Identity 15% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.														.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure											.	.						.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.						.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Y	I	G	A	H	V	S	A	.	.	A	G	G	L	A	.	.	.	N	A	A	I	R	A	A	E	I	D	A	T	A	F	A	L	.	.	.	.	.	.	.	.	F	T	K	N	Q	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	A	A	P	L	T	T	Q	T	I	D	E	F	K	A	A
Query Conservation											.	.						.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.						.	.	.																	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	I	I	C	E	I	G	I	N	H	E	G	S	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E	I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y
Template Known Secondary structure										T	T	T	T	T																T		S															G	G	G	G	G				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	K	Y	H	Y	T	S	A	Q	I	L	P	H	D	S	Y	L	I	N	L	G	H	P	V	T	E	A	L	E	K	S	R	D	A	F	I	D	E	M	Q	R	C	E	Q	L	G	L	S	L	L	N	F	H	P	G
Query Conservation
Alig confidence												.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	S	K	G	M	I	F	I	S	.	.	.	.	T	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G
Template Known Secondary structure					T	T						.	.	.	.				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T		S						G	G
Template Predicted Secondary structure												.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.					110	.	.	.																			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions