Return to main results Retrieve Phyre Job Id

Job DescriptionP41443
Confidence99.39%DateThu Jan 5 12:01:34 GMT 2012
Rank4Aligned Residues79
% Identity20%Templatec3sokB_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:fimbrial protein; PDBTitle: dichelobacter nodosus pilin fima
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  FTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAW
Query Conservation 
















 

 
                      
  

  

       
                   
Alig confidence 

























.




















































Template Conservation 



















 
    .    

   
                                           
Template Sequence  FTLIELMIVVAIIGILAAFAIPAYND. YIARSQAAEGLTLADGLKVRISDHLESGECKGGNDDKGKYALATIDGDYNKDA
Template Known Secondary structure 

.TTTSSSS




SS


TT
Template Predicted Secondary structure 

.




















Template SS confidence 















































































   1........10.........20...... ...30.........40.........50.........60.........70.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions