Job Description P41443 Confidence 99.55% Date Thu Jan 5 12:01:34 GMT 2012 Rank 2 Aligned Residues 116 % Identity 22% Template c2qv8B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:general secretion pathway protein h; PDBTitle: structure of the minor pseudopilin epsh from the type 2 secretion2 system of vibrio cholerae Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	E	T	A	A	R	F	T	A	A	L	E	L	A	I	D	R	A	T	L	S	G	Q	P	V	G	I	H	F	S	D	S	A	W	R	I	M	V	P	G	K	T	P	S	A	W	R	W	V	P	L	Q	E	D	A	A	D	E	S	Q	N	D	W	D	E	E	L	S	I	H	L	Q	P	F	K	P	D	D
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		E	A	K	I	S	A	Q	S	F	Y	Q	R	L	L	L	L	N	E	E	A	I	L	S	G	Q	D	F	G	V	R	I	D	V	D	T	R	R	L	T	F	L	Q	L	T	A	D	K	G	W	Q	K	W	Q	N	D	K	X	T	N	Q	T	T	L	K	E	G	L	Q	L	D	F	E	L	G	E	.	.	.	.	.
Template Known Secondary structure																																		T	T	T	T									T	T	T								S	S	S		S						T	T								.		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		S	N	Q	P	Q	V	V	I	L	A	D	G	Q	I	T	P	F	S	L	L	M	A	N	A	G	T	G	.	E	P	L	L	T	L	V	C	S	G	S	W	P	L	D
Query Conservation																													.
Alig confidence		.																											.
Template Conservation		.
Template Sequence		.	P	A	P	Q	L	F	V	L	S	S	G	E	V	T	P	F	T	L	S	I	F	P	K	G	Q	E	P	D	E	Q	W	R	V	T	A	Q	E	N	G	T	L	R
Template Known Secondary structure		.				S					T	T	S		B										G	G	G		S	S									T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions