Return to main results Retrieve Phyre Job Id

Job DescriptionP41443
Confidence8.59%DateThu Jan 5 12:01:34 GMT 2012
Rank17Aligned Residues29
% Identity21%Templatec1qleB_
PDB info PDB header:oxidoreductase/immune systemChain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: cryo-structure of the paracoccus denitrificans four-subunit2 cytochrome c oxidase in the completely oxidized state3 complexed with an antibody fv fragment
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30
Predicted Secondary structure 








Query SS confidence 




























Query Sequence  NQQRGFTLLEMMLVLALVAITASVVLFTY
Query Conservation      

















 

 
  
Alig confidence 




























Template Conservation       
  

 





 


  
   
 
Template Sequence  ARFTHNTPIEVIWTLVPVLILVAIGAFSL
Template Known Secondary structure 





Template Predicted Secondary structure 






Template SS confidence 




























   6970.........80.........90.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions