Job Description P25516 Confidence 10.44% Date Thu Jan 5 11:41:52 GMT 2012 Rank 84 Aligned Residues 77 % Identity 21% Template d1uf2c1 SCOP info A virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain Phytoreovirus capsid Resolution 3.50

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	D	G	L	D	S	L	P	L	A	D	R	A	T	I	A	N	M	S	P	E	Y	G	A	T	C	G	F	F	P	I	D	A	V	T	.	.	.	.	.	.	.	.	.	L	D	Y	M	R	L	S	G	R	S	E	D	Q	V	E	L	V	E	K	Y	A	K	A	Q	G	M	W	R	N	P	G	D	E	P	I
Query Conservation																																						.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.					.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		N	G	D	T	F	S	G	L	T	T	G	D	F	N	A	L	S	N	M	F	T	Q	L	S	V	S	.	.	.	.	.	.	D	P	R	V	P	L	Q	T	M	S	N	M	F	V	S	F	I	T	S	T	D	R	C	G	Y	M	L	R	K	T	.	.	.	.	.	.	.	.	.	W	F	N	S	D	T	K	P	T
Template Known Secondary structure		T	T	T			S	S												T	T	T	T	T				.	.	.	.	.	.		T																		T	T	T	T	T	G	G	G	S			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	S	T	L	E	L	D	M	N	D	V	E	A	S	L	A	G	P	K	R	P	Q	D	R	V	A	L	P	D	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	D	D	F	.	.	.	.	.	.	.	.	.	.	I	T	T	Y	I	R	P	R	L	Q	V	P	M	S	D	T
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.						S			S		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions