Job Description P25516 Confidence 100.00% Date Thu Jan 5 11:41:52 GMT 2012 Rank 4 Aligned Residues 512 % Identity 29% Template d1acoa2 SCOP info Aconitase iron-sulfur domain Aconitase iron-sulfur domain Aconitase iron-sulfur domain Resolution 2.05

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		22	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure										.																																							.	.	.	.
Query SS confidence										.																																							.	.	.	.
Query Sequence		Y	Y	S	L	P	L	A	A	.	K	S	L	G	D	I	T	R	L	P	K	S	L	K	V	L	L	E	N	L	L	R	W	Q	D	G	N	S	V	T	E	E	D	I	H	A	L	A	.	.	.	.	G	W	L	K	N	A	H	A	D	R	E	I	A	Y	R	P	A	R	V	L	M	Q	D	F	T	G	V	P	A
Query Conservation										.																																							.	.	.	.
Alig confidence										.																										.	.	.	.										.	.	.	.
Template Conservation																																				.	.	.	.
Template Sequence		K	V	A	M	S	H	F	E	P	H	E	Y	I	R	Y	D	L	L	E	K	N	I	D	I	V	R	K	R	L	N	R	P	L	T	.	.	.	.	L	S	E	K	I	V	Y	G	H	L	D	D	P	A	N	Q	E	I	E	R	G	K	T	Y	L	R	L	R	P	D	R	V	A	M	Q	D	A	T	A	Q	M	A
Template Known Secondary structure				B	S	S	T	T		T	T		B																			S				.	.	.	.								T	T	B	S		T	T	T					T	T	T	S							S
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	D	L	A	A	M	R	E	A	V	K	R	L	G	G	D	T	A	K	V	N	P	L	S	P	V	D	L	V	I	D	H	S	V	T	V	D	R	F	G	D	D	E	A	F	E	E	N	V	R	L	E	M	E	R	N	H	E	R	Y	V	F	L	K	W	G	K	Q	A	F	S	R	F	S	V	V	P	P	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																										.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																										.
Template Sequence		M	L	Q	F	I	S	S	G	L	.	.	.	.	.	.	.	.	.	.	.	P	K	V	A	V	P	S	T	I	H	C	D	H	L	I	E	A	Q	L	G	G	.	.	.	.	.	E	K	D	L	R	R	A	K	D	I	N	Q	E	V	Y	N	F	L	A	T	A	G	A	K	Y	.	G	V	G	F	W	R	P	G
Template Known Secondary structure									T		.	.	.	.	.	.	.	.	.	.	.	S	S		S	S								S	S			B	S	S			.	.	.	.	.											T															.	T						T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																										.
Template SS confidence
		80	.	.	.	.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		T	G	I	C	H	Q	V	N	L	E	Y	L	G	K	A	V	W	S	E	L	Q	D	G	E	W	I	A	Y	P	D	T	L	.	V	G	T	D	S	H	T	T	M	I	N	G	L	G	V	L	G	W	G	V	G	G	I	E	A	E	A	A	M	L	G	Q	P	V	S	M	L	I	P	D	V	V	G	F	K	L	T
Query Conservation																																		.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	I	I	H	Q	I	I	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	A	Y	P	G	V	L	L	I	G	T	D	S	H	T	P	N	G	G	G	L	G	G	I	C	I	G	V	G	G	A	D	A	V	D	V	M	A	G	I	P	W	E	L	K	C	P	K	V	I	G	V	K	L	T
Template Known Secondary structure		S	B									.	.	.	.	.	.	.	.	.	.	.	.	.	.		T			T	T						S	S	T	T	G	G	G	G	G	G	G	T																	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.															.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	R	E	G	I	T	A	T	D	L	V	L	T	V	T	Q	M	L	R	K	H	G	V	V	G	K	F	V	E	F	Y	G	D	G	L	D	S	L	P	L	A	D	R	A	T	I	A	N	M	S	P	E	Y	G	A	T	C	G	F	F	P	I	D	A	V	T	L	D	Y	M	R	L	S	G	R	S	E	D
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		G	S	L	S	G	W	T	S	P	K	D	V	I	L	K	V	A	G	I	L	T	V	K	G	G	T	G	A	I	V	E	Y	H	G	P	G	V	D	S	I	S	C	T	G	M	A	T	I	C	N	M	G	A	E	I	G	A	T	T	S	V	F	P	Y	N	H	R	M	K	K	Y	L	S	K	T	G	R	A	D	.
Template Known Secondary structure		S				T	T																T	T	T	T	B	T							S	G	G	G	G	G	S												G	G	G	G	T	B	S																	T	T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	E	L	V	E	K	Y	A	K	A	Q	G	M	W	R	N	P	G	D	E	P	I	F	T	S	T	L	E	L	D	M	N	D	V	E	A	S	L	A	G	P	K	R	P	Q	D	R	V	A	L	P	D	V	P	K	A	F	A	A	S	N	E	L	E	V	N	A	T	H	K	D	R	Q	P	V	D	Y	V	M
Query Conservation
Alig confidence		.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	I	A	N	L	A	D	E	F	K	D	H	L	V	P	D	S	G	C	H	Y	D	Q	L	I	E	I	N	L	S	E	L	K	P	H	I	N	G	P	F	T	P	D	L	A	H	P	V	A	E	V	G	S	V	A	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.								T	G	G	G	S	S			T	T				S							G	G	G								S	S	S	T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	H	Q	Y	Q	L	P	D	G	A	V	V	I	A	A	I	T	S	C	T	N	T	S	N	P	S	V	L	M	A	A	G	L	L	A	K	K	A	V	T	L	G	L	K	R	Q	P	W	V	K	A	S	L	A	P	G	S	K	V	V	S	D	Y	L	A	K	A	K	L	T	P	Y	L	D	E	L	G	F	N
Query Conservation
Alig confidence		.	.	.	.	.																															.												.	.
Template Conservation		.	.	.	.	.																															.												.	.
Template Sequence		.	.	.	.	.	E	G	W	P	L	D	I	R	V	G	L	I	G	S	C	T	N	S	S	Y	E	D	M	G	R	S	A	A	V	A	.	K	Q	A	L	A	H	G	L	K	C	K	.	.	S	Q	F	T	I	T	P	G	S	E	Q	I	R	A	T	I	E	R	D	G	Y	A	Q	V	L	R	D	V	G	G	I
Template Known Secondary structure		.	.	.	.	.		T				B								S	T	T	S		S												.						T	T				S	.	.	S							S	B										T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.																															.												.	.
Template SS confidence
							344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.				.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																				.	.	.																													.
Query SS confidence																				.	.	.																													.
Query Sequence		L	V	G	Y	G	C	T	T	C	I	G	N	S	G	P	L	P	D	.	.	.	P	I	E	T	A	I	K	K	S	D	L	T	V	G	A	V	L	S	G	N	R	N	F	E	G	R	I	H	.	P	L	V	K	T	N	W	L	A	S	P	P	L	V	V	A	Y	A	L	A	G	N	M	N	I	N	L	A	S	E
Query Conservation																				.	.	.																													.
Alig confidence																				.	.	.				.	.	.	.	.	.	.	.	.	.																.
Template Conservation																										.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	N	A	C	G	P	C	I	G	Q	W	D	R	K	D	I	K	K	G	E	K	N	.	.	.	.	.	.	.	.	.	.	T	I	V	T	S	Y	N	R	N	F	T	G	R	N	D	A	N	P	E	T	H	A	F	V	T	S	P	E	I	V	T	A	L	A	I	A	G	T	L	K	F	N	P	E	T	D
Template Known Secondary structure					S	S		G	G	G	G	T		B				S	S		T	T				.	.	.	.	.	.	.	.	.	.					S	S	S				T	T	T	T	T	S		T	T																			B	S	S			T	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.											440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	H	D	R	K	G	D	P	V	Y	L	K	D	I	W	P	S	A	Q	E	I	A	R	A	V	E	Q	V	S	T	E	M	F	R	K	E	Y	A	E	V	F	E	G	T	A
Query Conservation
Alig confidence				.												.	.									.	.	.	.
Template Conservation				.												.	.									.	.	.	.
Template Sequence		F	L	.	T	G	K	D	G	K	K	F	K	L	E	.	.	A	P	D	A	D	E	L	P	.	.	.	.	R	A	E	F	D	P	G	Q	D	T	Y	Q	H	P	P	K	D	S	S
Template Known Secondary structure				.			T	T	S							.	.						S	S		.	.	.	.	S	S						S								S	S
Template Predicted Secondary structure				.												.	.									.	.	.	.
Template SS confidence
		486	.		.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.					.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.