 |
Job Description | P25516 | Confidence | 12.55% | Date | Thu Jan 5 11:41:52 GMT 2012 |
Rank | 66 | Aligned Residues | 28 |
% Identity | 21% | Template | c2r2dC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:zn-dependent hydrolases; |
PDBTitle: structure of a quorum-quenching lactonase (aiib) from agrobacterium2 tumefaciens
|
Resolution | 1.75 Å |
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | E | A | V | K | R | L | G | G | D | T | A | K | V | N | P | L | S | P | V | D | L | V | I | D | H | S |
Query Conservation |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |
|
|   |
|   |
|
|   |
Template Sequence |   |
L | P | E | R | L | R | Q | L | G | L | S | P | D | D | I | S | T | V | V | L | S | H | L | H | N | D | H | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|
| G | G | G |
| S |  |  |  |
| S |
|
| S | T | T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|