Job Description P25516 Confidence 100.00% Date Thu Jan 5 11:41:52 GMT 2012 Rank 10 Aligned Residues 158 % Identity 31% Template c2pkpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:homoaconitase small subunit; PDBTitle: crystal structure of 3-isopropylmalate dehydratase (leud)2 from methhanocaldococcus jannaschii dsm2661 (mj1271) Resolution 2.10 Å

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		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	G	A	R	I	L	A	M	L	G	D	S	V	T	T	D	H	I	S	P	A	G	S	I	K	P	D	S	P	A	G	R	Y	L	Q	G	R	G	V	E	R	K	D	F	N	S	Y	G	S	R	R	G	N	H	E	V	M	M	R	G	T	F	A	N	I	R	I	R	N	E	M	V	P	G	V	E	G	G	M
Query Conservation
Alig confidence							.																.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	K	G	R	.	A	H	K	F	G	D	D	V	D	T	D	A	I	I	P	.	.	.	.	.	.	.	.	.	.	G	P	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	T	D	P	Y	E	L	A	S	H	C	M	A	G	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.						S			B					S		.	.	.	.	.	.	.	.	.	.	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									T	T	T	T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.																.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.											.	.	.	.																.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
		739	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	H	L	P	D	S	D	V	V	S	I	Y	D	A	A	M	R	Y	K	Q	E	Q	T	P	L	A	V	I	A	G	K	E	Y	G	S	G	S	S	R	D	W	A	A	K	G	P	R	L	L	G	I	R	V	V	I	A	E	S	F	E	R	I	H	R	S	N	L	I	G	M	G	I	L	P	L	E	F	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																																																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																																																						.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	N	F	P	K	K	V	K	E	G	D	.	.	.	V	I	V	A	G	E	N	F	G	C	G	S	S	R	E	Q	A	V	I	A	I	K	Y	C	G	I	K	A	V	I	A	K	S	F	A	R	I	F	Y	R	N	A	I	N	V	G	L	I	P	I	I	A	N	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	T							T	T		.	.	.						T	T	B	T	B	S	S											T	T	T							S		B												T								.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																																																						.
Template SS confidence
														43	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.			.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		G	V	T	R	K	T	L	G	L	T	G	E	E	K	I	D	I	G	D	L	Q	N	L	Q	P	G	A	T	V	P	V	T	L	T	R	A	D	G	S	Q	.	.	E	V	V	P	C	R	C	R	I	D	T	A	T	E	L	T	Y	Y	Q	N	D	G	I	L	H	Y	V	I	R	N	M	L
Query Conservation																																										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	E	I	K	D	G	D	I	V	E	I	D	L	D	K	E	E	I	V	I	T	N	K	N	K	T	I	K	C	E	T	P	K	G	L	E	R	E	I	L	A	A	G	G	L	V	N	Y	L	K	K	R	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G			T	T							T	T	T	T					G	G	G	T						B												T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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