 |
Job Description | P25516 | Confidence | 10.73% | Date | Thu Jan 5 11:41:52 GMT 2012 |
Rank | 80 | Aligned Residues | 29 |
% Identity | 28% | Template | c2kmfA_ |
PDB info |
PDB header:photosynthesis | Chain: A: PDB Molecule:photosystem ii 11 kda protein; |
PDBTitle: solution structure of psb27 from cyanobacterial photosystem2 ii
|
Resolution | UNK |
|
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | L | G | K | A | V | W | S | E | L | Q | D | G | E | W | I | A | Y | P | D | T | L | V | G | T | D | S | H | T | T | M | I | N | G | L | G | V | L | G |
Query Conservation |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|
|   |
|
|
Template Sequence |   |
D | Y | I | S | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | R | R | K | G | D | A | G | G | L | K | S | F | T | T | M | Q | T | A | L | N | S | L | A |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
48 | . | 50 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|