Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAK4
Confidence100.00%DateThu Jan 5 11:13:09 GMT 2012
Rank4Aligned Residues159
% Identity23%Templated1h0hb_
SCOP infoFerredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.... .....40.........50.........60......
Predicted Secondary structure 
















...............
























Query SS confidence 
































. . . . . . . . . . . . . . .































Query Sequence  NRFIIADASKCIGCRTCEVACVVSHQENQDCAS. . . . . . . . . . . . . . . LTPETFLPRIHVIKGVNISTATVCRQCEDAPC
Query Conservation      


  


 
  
  


           ...............                       
  
    
Alig confidence 
































...............































Template Conservation   
   

  




  
  

   
                                              
 

    
Template Sequence  SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKLVRMHEQEIDGRIDWLFFPDQCRHCIAPPC
Template Known Secondary structure 
GGG




T







SS
S

SSS
BTTBS
TT




SS
Template Predicted Secondary structure 



















































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   67..70.. .......80........ .90.........100.........110.........120.........130.......
Predicted Secondary structure 

.....








..



































..
Query SS confidence 





. . . . .















. .
















































. .
Query Sequence  ANVCPN. . . . . GAISRDKGFVHVMQER. . CIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHR. .
Query Conservation        .....            
   ..

 
  
  


  

                         

  

  ..
Alig confidence 





.....















..






















...............










..
Template Conservation     

             
 
    
   



  
  


  

       ...............   

  
  
  
Template Sequence  KATADMEDESAIIHDDATGCVLFTPKTKDLEDYESVISACPYDVPRKVAESN. . . . . . . . . . . . . . . QMAKCDMCIDRIT
Template Known Secondary structure  TTT
TTS
TTT


GGGGG
S

TT



TTSS...............



TTT
Template Predicted Secondary structure 




























...............



Template SS confidence 















































































   81........90.........100.........110.........120.........130.. .......140.....
 
   138.140.........150.........160.........170.....
Predicted Secondary structure  .











Query SS confidence  .





































Query Sequence  . EDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF
Query Conservation  .   


   

  

                       
Alig confidence  .





































Template Conservation   
  



  

  

 

                    
Template Sequence  NGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAY
Template Known Secondary structure  TT



SSS
TTT
Template Predicted Secondary structure 











Template SS confidence 






































   146...150.........160.........170.........180....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions