Phyre 2 alignment of P0AAK4 with c2v2kB

Job Description P0AAK4
Confidence 98.98% Date Thu Jan 5 11:13:09 GMT 2012

Rank 41 Aligned Residues 55

% Identity 31% Template c2v2kB_

PDB info PDB header:electron transport Chain: B: PDB Molecule:ferredoxin; PDBTitle: the crystal structure of fdxa, a 7fe ferredoxin from2 mycobacterium smegmatis

Resolution 1.6 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	83	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence	H	V	M	Q	E	R	C	I	G	C	.	.	K	T	C	V	V	A	C	P	Y	G	A	M	E	V	V	V	R	P	V	I	R	N	S	G	A	G	L	N	V	R	A	D	K	A	E	A	N	K	C	D	L	C	N	H	R	E	D	G	P	A	C	M	A	A	C	P	T	H	A	L	I	C	V	D	R
Query Conservation											.	.
Alig confidence											.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence	Y	V	I	A	E	P	C	V	D	V	K	D	K	A	C	I	E	E	C	P	V	D	C	I	Y	E	G	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	Y	I	H	P	D	E	C	V	D	G	A	.	.	.	.	.	.	.	C	E	P	V	C	P	V	E	A	I	Y	Y	E	D	D
Template Known Secondary structure					G	G	G	T	T	T				T	G	G	G	T		T	T							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T						.	.	.	.	.	.	.	S	G	G	G		T	T						G	G	G
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30														.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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