Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAK4
Confidence3.34%DateThu Jan 5 11:13:09 GMT 2012
Rank98Aligned Residues20
% Identity25%Templatec2ja6L_
PDB info PDB header:transferaseChain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii 7.7 PDBTitle: cpd lesion containing rna polymerase ii elongation complex2 b
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.......
Predicted Secondary structure 

















Query SS confidence 



















Query Sequence  GLNVRADKAEANKCDLCNHR
Query Conservation              

  

  
Alig confidence 



















Template Conservation 
    

  
 


 


 
Template Sequence  SSKLSLSRTDAVRCKDCGHR
Template Known Secondary structure 






TTSTT

SS



Template Predicted Secondary structure 












Template SS confidence 



















   35....40.........50....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions