Job Description P0AAK4 Confidence 99.61% Date Thu Jan 5 11:13:09 GMT 2012 Rank 9 Aligned Residues 143 % Identity 22% Template c1c4cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																			.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	R	T	C	E	V	.	.	.	.	.	.	.	.	.	A	C	V	V	S	H	Q	E	N	Q	D	C	A	S	L	T	P	E	T	F	L	P	R	I	H	V	I	K	G	V	N	I	S	T	A	T	V	C	R	Q	C	E	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	C
Query Conservation									.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	C	E	I	C	T	V	E	V	E	G	T	G	L	V	T	A	C	D	T	L	I	E	D	G	M	I	I	N	T	N	S	D	A	V	N	E	K	I	K	S	R	I	S	Q	L	L	D	I	H	E	F	K	C	G	P	C	N	R	R	E	N	C	E	F	L	K	L	V	I	K	Y	K	A	R	A	S	K	P	F
Template Known Secondary structure					T	T					T	T	T					T	T	S		B			T	T					S	S		S															T	T					T	T	T		T	T	G	G	G		S	S	S							T				S	S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		A	N	V	C	P	N	G	A	I	S	R	D	K	G	F	V	H	V	M	Q	E	R	C	I	G	C	K	T	C	V	V	A	C	P	.	.	.	.	Y	G	A	M	E	V	V	V	R	P	V	I	R	N	S	G	A	G	L	N	V	R	A	D	K	A	E	A	N	K	C	D	L	C	N	H	R	E	D	G	P	A
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.										.	.	.																								.	.	.	.	.	.
Template Conservation																																																	.	.	.																								.	.	.	.	.	.
Template Sequence		L	P	K	D	K	T	E	Y	V	D	E	R	S	K	S	L	T	V	D	R	T	K	C	L	L	C	G	R	C	V	N	A	C	G	K	N	T	E	T	Y	A	M	K	F	L	N	K	.	.	.	N	G	K	T	I	I	G	A	E	D	E	K	C	F	D	D	T	N	C	L	L	C	G	.	.	.	.	.	.	Q
Template Known Secondary structure				S			G	G	G					S	S	S					T	T	S															T	S				S						.	.	.	T	T						S	G	G	G			G	G	G	S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.																								.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.
		143	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		C	M	A	A	C	P	T	H	A	L	I	C	V	.	D	R	N	K	L	E	Q	L	S	A
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		C	I	I	A	C	P	V	A	A	L	S	E	K	S	H	M	D	R	V	K	N	A	L	N
Template Known Secondary structure							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions