Return to main results Retrieve Phyre Job Id

Job DescriptionP41068
Confidence3.16%DateThu Jan 5 12:01:24 GMT 2012
Rank44Aligned Residues34
% Identity12%Templatec3riaC_
PDB info PDB header:transport protein/immune systemChain: C: PDB Molecule:avermectin-sensitive glutamate-gated chloride channel glucl PDBTitle: c. elegans glutamate-gated chloride channel (glucl) in complex with2 fab, ivermectin and iodide.
Resolution3.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60
Predicted Secondary structure 




Query SS confidence 

































Query Sequence  WCLKYTVILPLATMALMALFVLWKDNTTPGKLLV
Query Conservation 
  

 







 


 


    



  

Alig confidence 

































Template Conservation    
     

  

  
   

 

      
  
Template Sequence  SFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVT
Template Known Secondary structure  TTTTTS
TT
Template Predicted Secondary structure 







Template SS confidence 

































   214.....220.........230.........240.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions