Job Description P41068 Confidence 3.02% Date Thu Jan 5 12:01:24 GMT 2012 Rank 50 Aligned Residues 78 % Identity 13% Template c1ciiA_ PDB info PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia Resolution 3.00 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	M	A	L	M	A	L	F	V	L	W	K	D	N	T	T	P	G	K	L	L	V	K	E	I	N	F	V	R	Q	T	A	P	A	G	Q	F	P	V	S	E	C	W	F	S	S	S	D	S	S	G	R	S	E	I	Q	G	I	C	H	Y	R	A	A	D	A	A	D	Y	V	R	E	T	D	R	S	L	M
Query Conservation
Alig confidence																																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Sequence		S	S	N	L	N	R	F	S	R	G	L	G	Y	A	G	K	F	T	S	L	A	D	W	I	T	E	F	G	K	A	V	R	T	E	.	.	.	.	.	N	W	R	P	L	F	V	K	T	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	A	G	N	A	A	T	.	.	.	A	L	V
Template Known Secondary structure													T			S		B																S	T	.	.	.	.	.	T									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B	T	T		B			.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.						.	.	.	.	.	.	.	570	.	.	.																	.	.	.	.	.	.	580	.				.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	V	T	A	L	W	A	T	L	A	L	M	Y	V	S	L	A	A	I	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	V	F	S	I	L	T	G	S	A	L	G	I	I	G	Y	G	L	L	M	A
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions