Job Description P0A9K7 Confidence 2.88% Date Thu Jan 5 11:10:34 GMT 2012 Rank 100 Aligned Residues 115 % Identity 16% Template c3l1nA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:cell wall antigen; PDBTitle: crystal structure of mp1p ligand binding domain 2 complexd with2 palmitic acid Resolution 1.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	T	M	G	G	M	V	E	Q	Q	L	S	D	A	I	T	A	M	H	N	Q	D	S	D	L	A	K	R	V	I	E	G	D	K	N	V	N	M	M	E	V	A	I	D	E	A	C	V	R	I	I	A	K	R	Q	P	T	A	S	D	L	R	L	V	M	V	I	S	K	T	I	A	E	L	E	R	I	G	D
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		L	L	A	D	G	N	V	L	I	K	A	T	L	D	G	V	Q	S	L	Q	N	E	P	P	L	S	S	X	E	A	L	A	L	V	G	P	V	Q	D	L	S	N	Q	I	X	L	A	I	Q	N	L	I	D	K	K	.	.	.	.	E	P	L	V	Q	A	G	F	G	G	K	V	E	N	N	L	R	Q	Q	E	E
Template Known Secondary structure																				T	T	T																																	T		.	.	.	.						T	T
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	D	K	I	C	R	T	A	L	E	K	F	S	Q	Q	H	Q	P	L	L	V	S	L	E	S	L	G	R	H	T	I	Q	M	L	H	D	V	L	D	A	F
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		A	A	Q	K	L	S	E	L	V	.	.	.	S	T	K	V	P	H	E	L	A	D	I	S	R	Q	L	S	D	G	I	A	A	G	I	K	K	G	I	D	A	F
Template Known Secondary structure											.	.	.				S		G	G	G
Template Predicted Secondary structure											.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions