Job Description P0A9K7 Confidence 4.77% Date Thu Jan 5 11:10:34 GMT 2012 Rank 54 Aligned Residues 157 % Identity 12% Template c3axjB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:translin associated factor x, isoform b; PDBTitle: high resolution crystal structure of c3po Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	F	N	A	E	L	E	S	I	R	T	Q	V	M	T	M	G	G	M	V	E	Q	Q	L	S	D	A	I	T	A	M	H	N	Q	D	S	D	L	A	K	R	V	I	E	G	D	K	N	V	N	M	M	E	V	A	I	D	E	A	C	V	R	I	I	A	K	R	Q	P	T	A	S	D	L	R	L	V	M	V
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		S	N	E	L	I	X	K	H	D	R	H	E	R	I	V	K	L	S	R	D	I	T	I	E	S	K	R	I	I	F	L	L	H	S	I	D	S	R	K	Q	N	K	.	E	K	V	L	E	E	A	R	Q	R	L	N	K	L	I	A	V	N	F	R	A	V	A	L	E	L	R	D	Q	D	V	Y	Q	F	R	S	S
Template Known Secondary structure																																		T	T			S		G	G	G		.																	T									T	T	T	S		T	T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	K	T	I	A	E	L	E	R	I	G	D	V	A	D	K	I	C	R	T	A	L	E	K	F	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	H	Q	P	L	L	V	S	L	E	S	L	G	R	H	T	I	Q	M	L	H	D	V	L	D	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	P	G	L	Q	E	F	I	Q	A	Y	T	Y	X	E	Y	L	C	H	E	D	A	E	G	E	N	E	T	K	S	V	S	D	W	Q	A	I	Q	A	V	X	Q	Y	V	E	E	S	S	P	K	K	F	Q	F	F	V	D	P	T	E	Y	I	L	G	L	S	D	L	T	G	E	L	X	R	R	C	I	N	S
Template Known Secondary structure																							T		S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	R	M	D	I	D	E	A	V	R	I	Y	R	E	D	K	K	V	D	Q	E	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	S	G	D	T	D	T	C	L	D	T	C	K	A	L	Q	H	F	Y	S	G	Y	I
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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