|   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | G | T | S | V | L | W | G | E | V | Y | A | T | D | N | V | W | I | . |
D | N | S | E | I | S | Q | G | A | Y | I | S | D | S | V | T | I | H | D | S | L | V | Y | G | . |
Q | C | R | I | F | G | H | A | L | I | D | Q | H | S | M | I | V | A | A | Q | G | L | T | P | D | H | Q | L | L | L | Q | I | Y | D | R |
Query Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |
|   |   |
|
|   |
| . |   |   |
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|
|   |
| . |
|
|   |
|   |
|
|
|   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |   | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
I | D | K | S | A | F | V | H | P | T | A | I | V | E | E | G | A | S | I | G | A | N | A | H | I | G | P | F | C | I | V | G | P | H | V | E | I | G | E | G | T | V | L | K | S | H | V | V | V | N | G | H | T | K | I | G | R | D | N | E | I | Y | Q | F | A | S | I | G | E | V | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
B |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |  |  |  |
| T | T |
|  |  |
| S | S |
|  |  |
| S |  |  |  |  |
| S | S |
|  |  |
| T | T |
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
  |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | |
. | . | . | . | . | 230 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
| . |
|
|  |  |  |
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | V | S | A | S | R | I | V | H | Q | A | Q | I | Y | G | D | A | V | V | R | Y | A | F | I | E | H | R | A | E | V | F | D | F | A | S | I | E | G | N | E | E | N | N | V | W | L | C | D | C | A | K | V | Y | G | H | A | Q | V | K | A | G | I | E | E | D | A | . |
I | P | T | I | H | Y | S | S | Q | V | A | E |
Query Conservation |   |
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|   |
|   |   | . |   |   |   |
|   |   |
|
|   |
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | D | L | K | Y | A | G | E | P | T | R | V | E | I | G | D | R | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | R | E | S | V | T | I | H | R | G | T | V | Q | G | G | G | L | T | K | V | G | S |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|
| S |
|
|
|  |  |  |  |
| S | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
| T | T |
|  |  |  |
|
|
| T | T | T | T | S |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | I | V | E | G | N | C | V | L | K | H | H | V | L | V | G | G | N | A | V | V | R | G | G | P | I | L | L | D | E | H | V | V | I | Q | G | E | S | R | I | T | G | A | V | I | I | E | N | H | V | E | L | T | D | H | A | V | V | E | A | F | D | G | D | T | V | H | V | R | G | P | K | V | I | N | G | E | E | R |
Query Conservation |   |
  |   |
|
|   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|   |
|
|   |   |   |
|   |
|   |
|   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
|   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
| . |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   |
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |
|   |
|
|
Template Sequence |   |
D | N | L | L | M | I | N | A | H | I | A | H | D | C | T | V | G | N | R | C | I | L | . |
A | N | N | A | T | L | A | G | H | V | S | V | D | D | F | A | I | I | G | G | M | T | A | V | H | Q | F | C | I | I | G | A | H | V | M | V | G | G | C | S | G | V | A | Q | D | V | P | P | Y | V | I | A | Q | G | N | H | A |
Template Known Secondary structure |   |
S |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S | S |
|  |  | . |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S | S |
|  |  |
| S | B | B |
| T | T |  |  |  |  |  | B | T |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  | . |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|  |  |
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
317 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
I | T | R |
Query Conservation |   |
|   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |   |
Template Sequence |   |
T | P | F |
Template Known Secondary structure |   |
 |  |  |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
193 | . | . |
  |