Job Description P76100 Confidence 100.00% Date Thu Jan 5 12:18:53 GMT 2012 Rank 1 Aligned Residues 320 % Identity 65% Template d2f9ca1 SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes YdcK-like Resolution 2.80

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	R	L	S	E	E	Q	R	A	F	S	Y	Q	E	D	G	T	K	K	N	V	L	L	R	Q	I	I	A	I	S	D	F	N	D	V	I	A	G	T	A	G	G	W	I	D	R	E	T	V	L	A	Q	E	G	N	C	W	I	Y	D	Q	N	A	I	A	F	G	G	A	V	I	S	G	N	T	R	I	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	R	L	S	E	G	P	R	A	F	T	Y	Q	V	D	G	E	K	K	S	V	L	L	R	Q	V	I	A	V	T	D	F	N	D	V	K	A	G	T	S	G	G	W	V	D	A	D	N	V	L	S	Q	Q	G	D	C	W	I	Y	D	E	N	A	M	A	F	A	G	T	E	I	T	G	N	A	R	I	T	Q
Template Known Secondary structure							S	S									S	S														S			S	S	S		T	T							S	S	T	T	S	B		S	S	S	S					S	T	T					S	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	V	L	W	G	E	V	Y	A	T	D	N	V	W	I	D	N	S	E	I	S	Q	G	A	Y	I	S	D	S	V	T	I	H	D	S	L	V	Y	G	Q	C	R	I	F	G	H	A	L	I	D	Q	H	S	M	I	V	A	A	Q	G	L	T	P	D	H	Q	L	L	L	Q	I	Y	D	R	A	R	V	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	C	T	L	Y	N	N	V	R	I	G	D	N	V	W	I	D	R	A	D	I	S	D	G	A	R	I	S	D	N	V	T	I	Q	S	S	S	V	R	E	E	C	A	I	Y	G	D	A	R	V	L	N	Q	S	E	I	L	A	I	Q	G	L	T	H	E	H	A	Q	I	L	Q	I	Y	D	R	A	T	V	N	H
Template Known Secondary structure		S					S	S					S	S				S	S					S	S					S	S					S					S	S					S	S					S	S										S	S	S	T	T							S	S					S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	I	V	H	Q	A	Q	I	Y	G	D	A	V	V	R	Y	A	F	I	E	H	R	A	E	V	F	D	F	A	S	I	E	G	N	E	E	N	N	V	W	L	C	D	C	A	K	V	Y	G	H	A	Q	V	K	A	G	I	E	E	D	A	I	P	T	I	H	Y	S	S	Q	V	A	E	Y	A	I	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	I	V	H	Q	V	Q	L	Y	G	N	A	T	I	T	H	A	F	I	E	H	R	A	E	V	F	D	F	A	L	I	E	G	D	K	D	N	N	V	W	I	C	D	C	A	K	V	Y	G	H	A	R	V	I	A	G	T	E	E	D	A	I	P	T	L	R	Y	S	S	Q	V	A	E	H	A	L	I	E	G
Template Known Secondary structure						S	S					S	S					S					S	S					S	S							S	S							S	S					S	S							S	S	T	T							S	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	V	L	K	H	H	V	L	V	G	G	N	A	V	V	R	G	G	P	I	L	L	D	E	H	V	V	I	Q	G	E	S	R	I	T	G	A	V	I	I	E	N	H	V	E	L	T	D	H	A	V	V	E	A	F	D	G	D	T	V	H	V	R	G	P	K	V	I	N	G	E	E	R	I	T	R	T	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	V	L	K	H	H	V	L	V	G	G	H	A	E	V	R	G	G	P	I	L	L	D	D	R	V	L	I	E	G	H	A	C	I	Q	G	E	I	L	I	E	R	Q	V	E	I	S	G	R	A	A	V	I	A	F	D	D	N	T	I	H	L	R	G	P	K	V	I	N	G	E	D	R	I	T	R	T	P	L
Template Known Secondary structure		S					T						S	S					S	S	S					S						S	S					S	S					S						S	S							S	S							S	S					S	S					S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions