Job Description P76100 Confidence 99.97% Date Thu Jan 5 12:18:53 GMT 2012 Rank 2 Aligned Residues 212 % Identity 13% Template c3pmoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; PDBTitle: the structure of lpxd from pseudomonas aeruginosa at 1.3 a resolution Resolution 1.30 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																								.																								.
Query SS confidence																								.																								.
Query Sequence		T	R	I	T	G	T	S	V	L	W	G	E	V	Y	A	T	D	N	V	W	I	D	.	N	S	E	I	S	Q	G	A	Y	I	S	D	S	V	T	I	H	D	S	L	V	Y	G	.	Q	C	R	I	F	G	H	A	L	I	D	Q	H	S	M	I	V	A	A	Q	G	L	T	P	D	H	Q	L	L	L	Q	I	Y
Query Conservation																								.																								.
Alig confidence																								.																								.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	H	P	T	A	I	V	A	A	D	A	E	V	D	P	S	A	S	V	G	A	Y	A	V	I	E	S	G	A	R	I	G	A	G	V	S	I	G	A	H	C	V	I	G	A	R	S	V	I	G	E	G	G	W	L	A	P	R	V	T	L	Y	H	D	V	.	.	.	.	.	.	.	.	.	.	T	I	G
Template Known Secondary structure		S				T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.											.	.	170
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	R	V	S	A	S	R	I	V	H	Q	A	Q	I	Y	G	D	A	V	V	R	Y	A	F	I	E	H	R	A	E	V	F	D	F	A	S	I	E	G	N	E	E	N	N	V	W	L	C	D	C	A	K	V	Y	G	H	A	Q	V	K	A	G	I	E	E	D	A	I	P	T	I	H	Y	S	S	Q	V	A
Query Conservation
Alig confidence															.													.	.
Template Conservation															.													.	.
Template Sequence		A	R	V	S	I	Q	S	G	A	V	I	G	G	.	E	G	F	G	F	A	N	E	K	G	V	W	.	.	Q	K	I	A	Q	I	G	G	V	T	I	G	D	D	V	E	I	G	A	N	T	T	I	D	R	G	A	L	S	D	T	L	I	G	N	G	V	K	L	D	N	Q	I	M	I	A	H	N	V	Q	I	G
Template Known Secondary structure		T	T					T	T						.									T	T			.	.													S	S					T	T							S	S	S						T	T					T	T					T	T
Template Predicted Secondary structure															.													.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	A	I	V	E	G	N	C	V	L	K	H	H	V	L	V	G	G	N	A	V	V	R	G	G	P	I	L	L	D	E	H	V	V	I	Q	G	E	S	R	I	T	G	A	V	I	I	E	N	H	V	E	L	T	D	H	A	V	V	E	A	F	D	G	D	T	V	H
Query Conservation
Alig confidence																									.																													.
Template Conservation																									.																													.
Template Sequence		D	H	T	A	M	A	A	C	V	G	I	S	G	S	A	K	I	G	R	H	C	M	L	.	A	G	G	V	G	L	V	G	H	I	E	I	C	D	N	V	F	V	T	G	M	T	M	V	T	R	S	I	.	T	E	P	G	S	Y	S	S	G	T	A	M	Q	P	A	A
Template Known Secondary structure		T	T					T	T					T	T					S	S				.		T	T					S	S					S	S					T	T					S		B	.		S							S
Template Predicted Secondary structure																									.																													.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions