 |
Job Description | P76100 | Confidence | 98.83% | Date | Thu Jan 5 12:18:53 GMT 2012 |
Rank | 48 | Aligned Residues | 121 |
% Identity | 15% | Template | c3d98A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:bifunctional protein glmu; |
PDBTitle: crystal structure of glmu from mycobacterium tuberculosis, ligand-free2 form
|
Resolution | 2.50 Å |
|
 |
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | L | I | D | Q | H | S | M | I | V | A | A | Q | G | L | T | P | D | H | Q | L | L | L | Q | I | Y | D | R | A | R | V | S | A | S | R | I | V | H | Q | A | Q | I | Y | G | D | A | V | V | R | Y | A | F | I | E | H | R | A | E | V | F | D | F | A | S | I | E | G | N | E | E | N | N | V | W | L | C | D | C | A |
Query Conservation |   |
|
|   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|
|
|
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |   | . |   |   |
|   |   |
|
|
|
|   |   |   |   | . | . | . | . |
|
|   |   |   |
Template Sequence |   |
T | T | W | I | D | V | D | V | T | I | G | R | D | T | V | I | H | P | G | T | . |
. |
. |
. |
Q | L | L | G | R | T | Q | I | G | G | R | C | V | V | G | P | D | T | T | L | T | D | V | A | V | G | D | G | A | S | V | V | R | . |
T | H | G | S | S | S | S | I | G | D | G | A | A | . |
. |
. |
. |
V | G | P | F | T |
Template Known Secondary structure |   |
G |  |  |  |
| T | T |
|  |  |
| T | T |
|  |  |
| S | S |  | . | . | . | . |  |  |  | T | T |
|  |  |
| S | S |
|  |  |
| S | S |  |  |  |  |  |  |  |  |
| T | T |
|  |  |
| S | . |  |  |  |  |  |  |  |  |
| T | T |
|  | . | . | . | . |  |
| S | S |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
| . | . | . | . |  |  |
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
| . |
|
|  |  |
|
|  |  |
|
|
|
|  | . | . | . | . |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
271 | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | |
. | . | . | . | . | . | 330 | . | . | . | . | . | . | |
|
|
|
. | . | . | 340 | . |
  |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | Y | G | H | A | Q | V | K | A | G | I | E | E | D | A | I | P | T | I | H | Y | S | S | Q | V | A | E | Y | A | I | V | E | G | N | C | V | L | K | H | H | V | L | V | G | G | N | A | V | V | R | G | G | P |
Query Conservation |   |
  |
|   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
  |
|   |   |   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |
| . |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
| . |   |   |   |
|
|
|   |   |   |   |
| . | . |
|
|
Template Sequence |   |
Y | L | R | P | G | T | A | L | G | A | D | G | K | L | G | A | F | V | E | V | . |
K | N | S | T | I | G | T | G | T | K | V | P | H | L | T | Y | V | . |
G | D | A | D | I | G | E | Y | S | N | I | . |
. |
G | A |
Template Known Secondary structure |   |
 |  |
| T | T |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  | . |  | S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |  | . |  | S |
|  |  |
| T | T |
| B |
| . | . |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  | . |  |
|
|  |  |
|
|
|
|  |  |
|
|
|
|  |  | . |
|
|  |  |  |
|
|
|
|  |  | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
342 | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | |
. | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | |
. | 380 | . | . | . | . | . | . | . | . | . | |
|
390 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|