Job Description P76100 Confidence 99.96% Date Thu Jan 5 12:18:53 GMT 2012 Rank 3 Aligned Residues 256 % Identity 19% Template c2iu9C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) Resolution 3.1 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																							.	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		I	I	A	I	S	D	F	N	D	V	I	A	G	T	A	G	G	W	I	D	R	E	T	V	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	N	C	W	I	Y	D	Q	N	.	.	.	.	.	.	.	.	A	I	A	F	G	G	A	V	I	S	G	N	T
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		L	S	G	V	E	E	I	E	E	A	K	T	A	H	I	.	T	F	L	D	N	E	K	Y	A	K	H	L	K	S	S	E	A	G	A	I	I	I	S	R	T	Q	F	Q	K	Y	R	D	L	N	K	N	F	L	I	T	S	E	S	P	S	L	V	F	Q	K	C	L	E	L	F	I	T	P	V	D	S	G	F	P
Template Known Secondary structure								T	T	T			T	T			.						S	T	T	G	G	G	T	S	S				S													T	T	S	S	S						S	S											T	T	T							S
Template Predicted Secondary structure																	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.																								.
Query SS confidence																							.																								.
Query Sequence		R	I	T	G	T	S	V	L	W	G	E	V	Y	A	T	D	N	V	W	I	D	.	N	S	E	I	S	Q	G	A	Y	I	S	D	S	V	T	I	H	D	S	L	V	Y	G	.	Q	C	R	I	F	G	H	A	L	I	D	Q	H	S	M	I	V	A	A	Q	G	L	T	P	D	H	Q	L	L	L	Q	I	Y	D
Query Conservation																							.																								.
Alig confidence																							.																								.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	H	P	T	A	V	I	H	P	T	A	I	I	E	D	H	V	C	I	E	P	Y	A	V	V	C	Q	H	A	H	V	G	S	A	C	H	I	G	S	G	S	V	I	G	A	Y	S	T	V	G	E	H	S	Y	I	H	P	R	V	V	I	R	E	R	V	.	.	.	.	.	.	.	.	.	.	S	I	G	K
Template Known Secondary structure		S	B		T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					T	T					S	S					S	S		.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.											.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	R	V	S	A	S	R	I	V	H	Q	A	Q	I	Y	G	D	A	V	V	R	Y	A	F	I	E	H	R	A	E	V	F	D	F	A	S	I	E	G	N	E	E	N	N	V	W	L	C	D	C	A	K	V	Y	G	H	A	Q	V	K	A	G	I	E	E	D	A	I	P	T	I	H	Y	S	S	Q	V	A	E
Query Conservation
Alig confidence														.															.
Template Conservation														.															.
Template Sequence		R	V	I	I	Q	P	G	A	V	I	G	S	.	C	G	F	G	Y	V	T	S	A	F	G	Q	H	K	.	H	L	K	H	L	G	K	V	I	I	E	D	D	V	E	I	G	A	N	T	T	I	D	R	G	R	F	K	H	S	V	V	R	E	G	S	K	I	D	N	L	V	Q	I	A	H	Q	V	E	V	G	Q
Template Known Secondary structure		T					T	T						.			S						S	S	S				.												T	T					T	T							S	S	S						T	T					T	T					T	T					T
Template Predicted Secondary structure														.															.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	I	V	E	G	N	C	V	L	K	H	H	V	L	V	G	G	N	A	V	V	R	G	G	P	I	L	L	D	E	H	V	V	I	Q	G	E	S	R	I	T	G	A	V	I	I	E	N	H	V	E	L	T	D	H	A	V	V	E	A	F	D	G	D	T	V	H	V	R	G	P	K	V	I	N	G	E	E	R
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	M	I	V	A	Q	A	G	I	A	G	S	T	K	I	G	N	H	V	I	I	G	G	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	G	H	I	C	I	A	D	H	V	I	M	M	A	Q	T	G	V	T	K	S	I	T	S	P	G	I	Y	G	G	A	P	A
Template Known Secondary structure		T					T	T					T	T					T	T					T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S					T	T					T	T					S		B		S						T	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280																				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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