Job Description P0A8A0 Confidence 100.00% Date Thu Jan 5 11:07:16 GMT 2012 Rank 1 Aligned Residues 240 % Identity 44% Template d1lfpa_ SCOP info YebC-like YebC-like YebC-like Resolution 1.72

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	W	A	N	T	R	H	R	K	A	A	Q	D	A	K	R	G	K	I	F	T	K	I	I	R	E	L	V	T	A	A	K	L	G	G	G	D	P	D	A	N	P	R	L	R	A	A	V	D	K	A	L	S	N	N	M	T	R	D	T	L	N	R	A	I	A	R	G	V	G	G	D	D	D	A	N	M	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	W	A	Q	I	K	H	K	K	A	K	V	D	A	Q	R	G	K	L	F	S	K	L	I	R	E	I	I	V	A	T	R	L	G	G	P	N	P	E	F	N	P	R	L	R	T	A	I	E	Q	A	K	K	A	N	X	P	W	E	N	I	E	R	A	I	K	K	G	A	G	E	L	E	G	E	Q	F	E	E
Template Known Secondary structure				S			S	S	S	S	S	S		T	T	T	S																					S		G	G	G														T	T															S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		I	I	Y	E	G	Y	G	P	G	G	T	A	I	M	I	E	C	L	S	D	N	R	N	R	T	V	A	E	V	R	H	A	F	S	K	C	G	G	N	L	G	T	D	G	S	V	A	Y	L	F	S	K	K	G	V	I	S	F	E	K	G	.	.	D	E	D	T	I	M	E	A	A	L	E	A	G	A	E	D	V
Query Conservation																																																															.	.
Alig confidence																																																															.	.
Template Conservation
Template Sequence		V	I	Y	E	G	Y	A	P	G	G	V	A	V	X	V	L	A	T	T	D	N	R	N	R	T	T	S	E	V	R	H	V	F	T	K	H	G	G	N	L	G	A	S	G	C	V	S	Y	L	F	E	R	K	G	Y	I	E	V	P	A	K	E	V	S	E	E	E	L	L	E	K	A	I	E	V	G	A	E	D	V
Template Known Secondary structure									T	T	T										S																T	T						T	T	S	S	G	G	G											G	G	G	S													T		S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		V	T	Y	D	D	G	A	I	D	V	Y	T	A	W	E	E	M	G	K	V	R	D	A	L	E	A	A	G	L	K	A	D	S	A	E	V	S	M	I	P	S	T	K	A	D	M	.	D	A	E	T	A	P	K	L	M	R	L	I	D	M	L	E	D	C	D	D	V	Q	E	V	Y	H	N	G	E	I	S	D	E
Query Conservation																																																.
Alig confidence				.																																												.
Template Conservation				.
Template Sequence		Q	P	.	G	E	E	V	H	I	I	Y	T	V	P	E	E	L	Y	E	V	K	E	N	L	E	K	L	G	V	P	I	E	K	A	Q	I	T	W	K	P	I	S	T	V	Q	I	N	D	E	E	T	A	Q	K	V	I	K	L	L	N	A	L	E	E	L	D	D	V	Q	Q	V	I	A	N	F	E	I	P	E	E
Template Known Secondary structure				.		S	S								G	G	G										T	T	T				S									S	S																						T	S	T	T												S
Template Predicted Secondary structure				.
Template SS confidence
		165	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		242	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	Q	K
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions