Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADY7
Confidence100.00%DateThu Jan 5 11:22:06 GMT 2012
Rank9Aligned Residues125
% Identity20%Templated1vqoh1
SCOP infoalpha/beta-Hammerhead Ribosomal protein L16p/L10e Ribosomal protein L10e
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20...... ... 30.........40.........50......... 60.........70..
Predicted Secondary structure 




















.....







......






Query SS confidence 






















. . . .


.





























. . . . . .












Query Sequence  PKRTKFRKMHKGRNRGLAQGTDV. . . . SFG. SFGLKAVGRGRLTARQIEAARRAMTRAVKR. . . . . . QGKIWIRVFPDKP
Query Conservation 

  
  
  
 
         
....  
. 


 
   
 
   





  
 
 


......    



 
  
Alig confidence 






















....


.





























......












Template Conservation 

       
  

  
  
        
     
 
 
   
    




  
 
 
 
  
      
 

  
   
Template Sequence  TRREYITGIPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQV
Template Known Secondary structure 

TTS










S
TTS
GGG
SSS

TT
S





Template Predicted Secondary structure 



































Template SS confidence 















































































   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   73......80.........90.........100....... ..110.........120.........130
Predicted Secondary structure 




















..




Query SS confidence 


































. .






















Query Sequence  ITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDG. . VPEELAREAFKLAAAKLPIKTTF
Query Conservation 



    






      
 

 
 




  ..     
  

  
  


     
Alig confidence 



..




























..






















Template Conservation   
  ..  


 




   




 
 




         





 
  


   

Template Sequence  LREN. . KDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRI
Template Known Secondary structure 
..


STT



TT

STTGGGSSS

Template Predicted Secondary structure 



..

























Template SS confidence 



























































   95... .100.........110.........120.........130.........140.........150..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions