Job Description P0ADY7 Confidence 100.00% Date Thu Jan 5 11:22:06 GMT 2012 Rank 6 Aligned Residues 128 % Identity 23% Template c2zkrh_ PDB info PDB header:ribosomal protein/rna Chain: H: PDB Molecule:rna expansion segment es12; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																										.	.	.	.			.																													.	.	.	.	.
Query SS confidence																										.	.	.	.			.																													.	.	.	.	.
Query Sequence		P	K	R	T	K	F	R	K	M	H	K	G	R	N	R	G	L	A	Q	G	T	D	V	S	.	.	.	.	F	G	.	S	F	G	L	K	A	V	G	R	G	R	L	T	A	R	Q	I	E	A	A	R	R	A	M	T	R	A	V	.	.	.	.	.	K	R	Q	G	K	I	W	I	R	V	F	P	D	K	P	I
Query Conservation																										.	.	.	.			.																													.	.	.	.	.
Alig confidence																										.	.	.	.			.																													.	.	.	.	.
Template Conservation
Template Sequence		P	K	S	R	F	C	R	G	V	P	D	A	K	I	R	I	F	D	L	G	R	K	K	A	K	V	D	E	F	P	L	C	G	H	M	V	S	D	E	Y	E	Q	L	S	S	E	A	L	E	A	A	R	I	C	A	N	K	Y	M	V	K	S	C	G	K	D	G	F	H	I	R	V	R	L	H	P	F	H	V	I
Template Known Secondary structure				T	T	T											S	S					S	S	S		S	T	T		S								S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		T	E	K	P	L	A	V	R	M	G	K	G	K	.	.	.	.	.	.	.	.	.	G	N	V	E	Y	W	V	A	L	I	Q	P	G	K	V	L	Y	E	M	D	G	V	.	.	P	E	E	L	A	R	E	A	F	K	L	A	A	A	K	L	P	I	K	T	T	F	V
Query Conservation															.	.	.	.	.	.	.	.	.																							.	.
Alig confidence															.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		R	I	N	K	M	L	S	C	A	G	A	D	R	L	Q	T	G	M	R	G	A	F	G	K	P	Q	G	T	V	A	K	V	H	I	G	Q	V	I	M	S	I	R	T	K	L	Q	N	K	E	H	V	I	E	A	L	R	R	A	K	F	K	F	P	G	R	Q	K	I	H
Template Known Secondary structure					T	T	T			S	S		S	S	T	T	S	S	S	T	T														T	T										S	T	T														T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions