 |
Job Description | P0ADY7 | Confidence | 18.09% | Date | Thu Jan 5 11:22:06 GMT 2012 |
Rank | 73 | Aligned Residues | 43 |
% Identity | 12% | Template | c2vwrA_ |
PDB info |
PDB header:protein-binding | Chain: A: PDB Molecule:ligand of numb protein x 2; |
PDBTitle: crystal structure of the second pdz domain of numb-binding2 protein 2
|
Resolution | 1.3 Å |
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | V | E | Y | W | V | A | L | I | Q | P | G | K | V | L | Y | E | M | D | G | . |
. |
. |
. |
. |
V | P | E | E | L | A | R | E | A | F | K | L | A | A | A | K | L | P | I | K | T | T |
Query Conservation |   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|   |   | . | . | . | . | . |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
G | G | L | A | A | Q | D | G | R | L | S | S | N | D | R | V | L | A | I | N | G | H | D | L | K | Y | G | T | P | E | L | A | A | Q | I | I | Q | A | S | G | E | R | V | N | L | T | I | A |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |
|
|
|
| T | T |
|  |  |  |  |  | T | T |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
372 | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|