Job Description P04825 Confidence 67.42% Date Thu Jan 5 10:58:23 GMT 2012 Rank 46 Aligned Residues 223 % Identity 10% Template c3o0yC_ PDB info PDB header:lipid binding protein Chain: C: PDB Molecule:lipoprotein; PDBTitle: the crystal structure of the putative lipoprotein from colwellia2 psychrerythraea Resolution 1.70 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		D	R	G	N	L	D	R	A	P	W	A	M	T	S	L	K	N	S	M	K	W	D	E	E	R	F	G	L	E	Y	D	L	D	I	Y	M	I	V	A	V	D	F	F	N	.	.	.	.	.	M	G	A	M	E	N	K	G	L	N	I	F	N	S	K	Y	V	L	A	R	T	D	T	A	T	D	K	D	Y	L	D
Query Conservation																																														.	.	.	.	.
Alig confidence																													.																	.	.	.	.	.
Template Conservation																													.
Template Sequence		I	A	G	R	E	E	L	L	S	D	I	N	G	Y	I	T	E	V	T	A	K	M	A	P	V	F	R	.	T	T	P	S	Y	Q	V	E	V	K	S	F	P	V	E	V	Q	D	G	A	P	G	G	Q	Y	T	S	P	A	V	D	G	S	K	P	G	I	Y	W	I	N	L	R	D	M	K	A	N	P	K	F	G
Template Known Secondary structure																							T	G	G	G			.				S										T	T	T	T	T	T	S		S								T	T	S	S										S		G	G	G	S
Template Predicted Secondary structure																													.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		291	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.										.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																			.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence												.	.																			.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		I	E	R	V	I	G	H	E	Y	F	.	.	H	N	W	T	G	N	R	V	T	C	R	D	W	F	Q	L	S	L	.	.	.	.	.	.	.	.	.	K	E	G	L	T	V	F	R	D	Q	E	F	S	S	D	L	G	S	R	.	.	A	V	N	R	I	N	N	V	R	T	M	R	G	L	Q	F	A	E	D	A
Query Conservation												.	.																			.	.	.	.	.	.	.	.	.																				.	.
Alig confidence												.	.									.										.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																						.
Template Sequence		L	K	T	L	T	Y	H	E	A	N	P	G	H	H	W	Q	I	A	L	N	.	L	D	Q	A	E	L	P	F	L	R	R	I	A	P	Y	N	A	Y	T	E	G	W	A	L	Y	S	E	Q	V	A	Y	E	L	G	M	Y	E	N	D	P	F	G	D	L	G	R	L	Q	A	E	L	F	R	A	V	R	L	V	V
Template Known Secondary structure										S	T	T	T									.		T		T	T	S						T																					T	T	T	T	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.												.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	M	A	H	P	I	R	P	D	M	V	I	E	M	N	N	F	Y	T	L	T	V	Y	E	K	G	A	E	V	I	R	M	I	H	T	L	L	.	.	.	.	.	.	.	.	.	.	.	G	E	E	N	F	Q	K	G	M	Q	L	Y	F	E	R	H	D	G	S	A	A	T	C	D	D	F	V	Q	A	M	E
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation							.																																																				.
Template Sequence		D	T	G	L	H	.	D	K	R	W	T	R	E	Q	A	I	S	Y	M	S	E	Q	T	G	T	A	E	S	D	V	V	A	E	I	E	R	Y	M	A	W	P	G	Q	A	L	G	Y	K	L	G	M	L	K	I	L	S	L	.	R	E	Q	A	K	A	R	L	G	D	K	F	D	L	A	E	F	H	D	V	V	L
Template Known Secondary structure							.	T	T															S																	S	T	T	G	G	G													.									G	G	G
Template Predicted Secondary structure							.																																																				.
Template SS confidence
		511	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		D	A	S	N	V	D	L	S	.	.	.	.	H	F	R	R	W	Y	S	Q
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		L	N	G	A	V	P	M	A	V	L	S	R	N	V	N	H	W	L	D	N
Template Known Secondary structure		T	T		S																T
Template Predicted Secondary structure
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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