Job Description P04825 Confidence 100.00% Date Thu Jan 5 10:58:23 GMT 2012 Rank 10 Aligned Residues 433 % Identity 21% Template c3ciaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cold-active aminopeptidase; PDBTitle: crystal structure of cold-aminopeptidase from colwellia2 psychrerythraea Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.											.	.	80	.	.
Predicted Secondary structure																														.							.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.							.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	Y	Q	I	T	D	I	D	L	T	F	D	L	D	A	Q	K	T	V	V	T	A	V	S	Q	A	.	V	R	H	G	A	S	.	D	A	P	L	R	L	N	G	E	D	L	K	L	V	S	V	H	I	N	D	E	P	W	T	A	W	K	E	E	.	.	.	.	.	.	.	.	.	.	E	G	A	L	V
Query Conservation																														.							.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																														.							.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	D	Q	V	K	A	T	H	V	Y	L	D	L	N	V	D	F	D	K	K	S	L	S	G	F	A	E	L	S	L	D	W	F	T	D	N	K	A	P	L	I	L	D	T	R	D	L	V	I	H	R	V	M	A	K	N	S	Q	G	Q	W	V	K	V	N	Y	D	L	A	K	R	D	D	V	L	G	S	K	L	T
Template Known Secondary structure		T	T	T														T	T	T	T															S	S							B		S	S											T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.										.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		I	S	N	L	P	E	R	F	T	L	K	I	I	N	E	I	S	P	A	A	N	T	A	L	E	G	L	Y	Q	S	G	D	.	.	.	.	.	.	.	.	.	A	L	C	T	Q	C	E	A	E	G	F	R	H	I	T	Y	Y	L	D	R	P	D	V	L	A	R	F	T	T	K	I	I	A	D	K	I	K	Y	P
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.								.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation																							.	.	.	.																																																						.	.
Template Sequence		I	N	T	P	L	N	A	K	K	V	R	V	Y	Y	N	S	T	E	K	A	T	.	.	.	.	G	L	Q	W	L	S	A	E	Q	T	A	G	K	E	K	P	F	L	F	S	Q	N	Q	A	I	H	A	R	S	W	I	P	I	Q	D	T	P	S	V	R	V	T	Y	T	A	R	I	T	T	D	K	D	L	.	.
Template Known Secondary structure						T	T		S										T	T		T	.	.	.	.	T						G	G	G	S	S	S	S	S	S								T	T	T	T	G	G	G	T	S		B				T	T													T	T		.	.
Template Predicted Secondary structure																							.	.	.	.																																																						.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	L	S	N	G	N	R	V	A	Q	G	E	L	E	N	G	R	H	W	V	Q	W	Q	D	P	F	P	K	P	C	Y	L	F	A	L	V	A	G	D	F	D	V	L	R	D	T	F	T	T	R	S	G	R	E	V	A	L	E	L	Y	V	D	R	G	N	L	D	R	A	P	W	A	M	T	S	L	K	N	S
Query Conservation
Alig confidence														.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Sequence		L	A	V	M	S	A	N	N	E	R	D	G	.	.	.	.	.	.	.	D	Y	F	F	S	M	P	Q	A	I	P	P	Y	L	I	A	I	G	V	G	D	L	E	F	K	A	M	.	.	.	.	.	.	.	.	S	H	Q	T	G	I	Y	A	E	S	Y	I	L	D	A	A	V	A	E	F	D	D	T	Q	A	M
Template Known Secondary structure						S	S						S	.	.	.	.	.	.	.												G	G	G							S						S	.	.	.	.	.	.	.	.	S	S	S							S	T	T								S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		M	K	W	D	E	E	R	F	G	L	E	Y	D	L	D	I	Y	M	I	V	A	V	D	.	F	F	N	M	G	A	M	E	N	K	G	L	N	I	F	N	S	K	Y	V	L	A	R	T	D	T	A	T	D	K	D	Y	L	D	I	E	R	V	I	G	H	E	Y	F	H	N	W	T	G	N	R	V	T	C	R	D
Query Conservation																									.
Alig confidence											.														.																											.	.	.	.	.	.	.	.	.
Template Conservation											.																																									.	.	.	.	.	.	.	.	.
Template Sequence		I	D	K	A	E	Q	M	Y	G	.	K	Y	R	W	G	R	Y	D	L	L	M	L	P	P	S	F	P	F	G	G	M	E	N	P	R	L	S	F	I	T	P	T	V	V	A	G	D	K	S	L	.	.	.	.	.	.	.	.	.	V	N	L	I	A	H	E	L	A	H	S	W	S	G	N	L	V	T	N	E	S
Template Known Secondary structure											.			T	T	S									T	T		S	S	S					T	T						G	G	G			S	S	S		S	.	.	.	.	.	.	.	.	.	T										T	T	B	T	T	T				S	S
Template Predicted Secondary structure											.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.										.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		W	F	Q	L	S	L	K	E	G	L	T	V	F	R	D	Q	E	F	S	S	D	L	G	S	R	A	V	N	R	I	N	N	V	R	T	M	R	G	L	Q	F	A	E	D	A	S	P	M	A	H	P	I	R	P	D	.	.	M	V	I	E	M	N	N	F	Y	T	L	T	V	Y	E	K	G	A	E	V	I	R	M
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		W	R	D	L	W	L	N	E	G	F	T	S	Y	V	E	N	R	I	M	E	A	V	F	G	T	D	R	A	V	M	E	Q	A	L	G	A	Q	D	L	N	A	E	I	L	E	L	D	A	S	D	T	Q	L	Y	I	D	L	K	G	R	D	P	D	D	A	F	S	G	V	P	Y	V	K	G	Q	L	F	L	M	Y
Template Known Secondary structure		T	T	S	T																																										S		T	T	T	T	S	S	S				T	T			T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.							.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		I	H	T	L	L	G	E	E	N	F	Q	K	G	M	Q	L	Y	F	E	R	H	D	G	S	A	A	T	C	D	D	F	V	Q	A	M	E	D	A	S	N	V	D	L	S	.	.	.	.	.	.	H	F	R	R	W	Y	S	Q	S	G	T	P	I	V	T	V	K	D	D	Y	N	P	E	T	E	Q	Y	T	L	T
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		L	E	E	K	F	G	R	E	R	F	D	A	F	V	L	E	Y	F	D	S	H	A	F	Q	S	L	G	T	D	N	F	V	K	Y	L	K	A	N	L	T	D	K	Y	P	N	I	V	S	D	N	E	I	N	E	W	I	F	K	A	G	L	P	S	Y	A	P	Q	P	T	S	N	A	.	.	.	.	.	.	F	K
Template Known Secondary structure																						T	T	T															T	T	T	T	T	S	T	T	S	S											S	S	S			S	S	S								.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.							.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	Q	R	T	P	A	T	P	D	Q	A	E	K	Q	P	L	H	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	D	K	Q	I	N	Q	L	V	T	D	E	L	T	L	E	Q	L	P
Template Known Secondary structure							T			T	T	T	T	S	S			S		S	G
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.