Job Description P04825 Confidence 100.00% Date Thu Jan 5 10:58:23 GMT 2012 Rank 1 Aligned Residues 866 % Identity 100% Template c3b37A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aminopeptidase n; PDBTitle: crystal structure of e. coli aminopeptidase n in complex with tyrosine Resolution 1.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	A	K	Y	R	H	D	Y	R	A	P	D	Y	Q	I	T	D	I	D	L	T	F	D	L	D	A	Q	K	T	V	V	T	A	V	S	Q	A	V	R	H	G	A	S	D	A	P	L	R	L	N	G	E	D	L	K	L	V	S	V	H	I	N	D	E	P	W	T	A	W	K	E	E	E	G	A	L	V	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	A	K	Y	R	H	D	Y	R	A	P	D	Y	Q	I	T	D	I	D	L	T	F	D	L	D	A	Q	K	T	V	V	T	A	V	S	Q	A	V	R	H	G	A	S	D	A	P	L	R	L	N	G	E	D	L	K	L	V	S	V	H	I	N	D	E	P	W	T	A	W	K	E	E	E	G	A	L	V	I	S
Template Known Secondary structure							G	G	G					S														S	S														S		T	T								S	S									T	T					S					T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	E	R	F	T	L	K	I	I	N	E	I	S	P	A	A	N	T	A	L	E	G	L	Y	Q	S	G	D	A	L	C	T	Q	C	E	A	E	G	F	R	H	I	T	Y	Y	L	D	R	P	D	V	L	A	R	F	T	T	K	I	I	A	D	K	I	K	Y	P	F	L	L	S	N	G	N	R	V	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	P	E	R	F	T	L	K	I	I	N	E	I	S	P	A	A	N	T	A	L	E	G	L	Y	Q	S	G	D	A	L	C	T	Q	C	E	A	E	G	F	R	H	I	T	Y	Y	L	D	R	P	D	V	L	A	R	F	T	T	K	I	I	A	D	K	I	K	Y	P	F	L	L	S	N	G	N	R	V	A	Q
Template Known Secondary structure		S			S												G	G	G			S								T	T							T	T	T	T	G	G	G	T	S	S	B			S	T	T													T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	E	N	G	R	H	W	V	Q	W	Q	D	P	F	P	K	P	C	Y	L	F	A	L	V	A	G	D	F	D	V	L	R	D	T	F	T	T	R	S	G	R	E	V	A	L	E	L	Y	V	D	R	G	N	L	D	R	A	P	W	A	M	T	S	L	K	N	S	M	K	W	D	E	E	R	F	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	L	E	N	G	R	H	W	V	Q	W	Q	D	P	F	P	K	P	C	Y	L	F	A	L	V	A	G	D	F	D	V	L	R	D	T	F	T	T	R	S	G	R	E	V	A	L	E	L	Y	V	D	R	G	N	L	D	R	A	P	W	A	M	T	S	L	K	N	S	M	K	W	D	E	E	R	F	G	L	E
Template Known Secondary structure					S	T	T														G	G	G																		T	T												T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	L	D	I	Y	M	I	V	A	V	D	F	F	N	M	G	A	M	E	N	K	G	L	N	I	F	N	S	K	Y	V	L	A	R	T	D	T	A	T	D	K	D	Y	L	D	I	E	R	V	I	G	H	E	Y	F	H	N	W	T	G	N	R	V	T	C	R	D	W	F	Q	L	S	L	K	E	G	L	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	D	L	D	I	Y	M	I	V	A	V	D	F	F	N	M	G	A	M	E	N	K	G	L	N	I	F	N	S	K	Y	V	L	A	R	T	D	T	A	T	D	K	D	Y	L	D	I	E	R	V	I	G	H	E	Y	F	H	N	W	T	G	N	R	V	T	C	R	D	W	F	Q	L	S	L	K	E	G	L	T	V
Template Known Secondary structure				S	S								S			S	S	S					T	T						G	G	G	T				T	T	T																			T	T	T	B	T	T	T				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	D	Q	E	F	S	S	D	L	G	S	R	A	V	N	R	I	N	N	V	R	T	M	R	G	L	Q	F	A	E	D	A	S	P	M	A	H	P	I	R	P	D	M	V	I	E	M	N	N	F	Y	T	L	T	V	Y	E	K	G	A	E	V	I	R	M	I	H	T	L	L	G	E	E	N	F	Q	K	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	D	Q	E	F	S	S	D	L	G	S	R	A	V	N	R	I	N	N	V	R	T	M	R	G	L	Q	F	A	E	D	A	S	P	M	A	H	P	I	R	P	D	M	V	I	E	M	N	N	F	Y	T	L	T	V	Y	E	K	G	A	E	V	I	R	M	I	H	T	L	L	G	E	E	N	F	Q	K	G	M
Template Known Secondary structure												S																T						T	S	T	T				S	S		S			S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y	F	E	R	H	D	G	S	A	A	T	C	D	D	F	V	Q	A	M	E	D	A	S	N	V	D	L	S	H	F	R	R	W	Y	S	Q	S	G	T	P	I	V	T	V	K	D	D	Y	N	P	E	T	E	Q	Y	T	L	T	I	S	Q	R	T	P	A	T	P	D	Q	A	E	K	Q	P	L	H	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Y	F	E	R	H	D	G	S	A	A	T	C	D	D	F	V	Q	A	M	E	D	A	S	N	V	D	L	S	H	F	R	R	W	Y	S	Q	S	G	T	P	I	V	T	V	K	D	D	Y	N	P	E	T	E	Q	Y	T	L	T	I	S	Q	R	T	P	A	T	P	D	Q	A	E	K	Q	P	L	H	I	P
Template Known Secondary structure									T	T																					T	T	T	T							S												T	T	T	T													B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	I	E	L	Y	D	N	E	G	K	V	I	P	L	Q	K	G	G	H	P	V	N	S	V	L	N	V	T	Q	A	E	Q	T	F	V	F	D	N	V	Y	F	Q	P	V	P	A	L	L	C	E	F	S	A	P	V	K	L	E	Y	K	W	S	D	Q	Q	L	T	F	L	M	R	H	A	R	N	D	F	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	I	E	L	Y	D	N	E	G	K	V	I	P	L	Q	K	G	G	H	P	V	N	S	V	L	N	V	T	Q	A	E	Q	T	F	V	F	D	N	V	Y	F	Q	P	V	P	A	L	L	C	E	F	S	A	P	V	K	L	E	Y	K	W	S	D	Q	Q	L	T	F	L	M	R	H	A	R	N	D	F	S	R
Template Known Secondary structure									T	T	S		B						T	T					S						S	S											S							S	T	T			S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	A	A	Q	S	L	L	A	T	Y	I	K	L	N	V	A	R	H	Q	Q	G	Q	P	L	S	L	P	V	H	V	A	D	A	F	R	A	V	L	L	D	E	K	I	D	P	A	L	A	A	E	I	L	T	L	P	S	V	N	E	M	A	E	L	F	D	I	I	D	P	I	A	I	A	E	V	R	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	D	A	A	Q	S	L	L	A	T	Y	I	K	L	N	V	A	R	H	Q	Q	G	Q	P	L	S	L	P	V	H	V	A	D	A	F	R	A	V	L	L	D	E	K	I	D	P	A	L	A	A	E	I	L	T	L	P	S	V	N	E	M	A	E	L	F	D	I	I	D	P	I	A	I	A	E	V	R	E	A	L
Template Known Secondary structure																						T	T																				S	S	S									T	S									T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	L	A	T	E	L	A	D	E	L	L	A	I	Y	N	A	N	Y	Q	S	E	Y	R	V	E	H	E	D	I	A	K	R	T	L	R	N	A	C	L	R	F	L	A	F	G	E	T	H	L	A	D	V	L	V	S	K	Q	F	H	E	A	N	N	M	T	D	A	L	A	A	L	S	A	A	V	A	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	T	L	A	T	E	L	A	D	E	L	L	A	I	Y	N	A	N	Y	Q	S	E	Y	R	V	E	H	E	D	I	A	K	R	T	L	R	N	A	C	L	R	F	L	A	F	G	E	T	H	L	A	D	V	L	V	S	K	Q	F	H	E	A	N	N	M	T	D	A	L	A	A	L	S	A	A	V	A	A	Q
Template Known Secondary structure									T											T			S	S				S																			T	S	S																S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	C	R	D	A	L	M	Q	E	Y	D	D	K	W	H	Q	N	G	L	V	M	D	K	W	F	I	L	Q	A	T	S	P	A	A	N	V	L	E	T	V	R	G	L	L	Q	H	R	S	F	T	M	S	N	P	N	R	I	R	S	L	I	G	A	F	A	G	S	N	P	A	A	F	H	A	E	D	G	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	C	R	D	A	L	M	Q	E	Y	D	D	K	W	H	Q	N	G	L	V	M	D	K	W	F	I	L	Q	A	T	S	P	A	A	N	V	L	E	T	V	R	G	L	L	Q	H	R	S	F	T	M	S	N	P	N	R	I	R	S	L	I	G	A	F	A	G	S	N	P	A	A	F	H	A	E	D	G	S	G
Template Known Secondary structure			T	T													T	T														T				T	T									T	T		T	T			T	T																					T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	F	L	V	E	M	L	T	D	L	N	S	R	N	P	Q	V	A	S	R	L	I	E	P	L	I	R	L	K	R	Y	D	A	K	R	Q	E	K	M	R	A	A	L	E	Q	L	K	G	L	E	N	L	S	G	D	L	Y	E	K	I	T	K	A	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	F	L	V	E	M	L	T	D	L	N	S	R	N	P	Q	V	A	S	R	L	I	E	P	L	I	R	L	K	R	Y	D	A	K	R	Q	E	K	M	R	A	A	L	E	Q	L	K	G	L	E	N	L	S	G	D	L	Y	E	K	I	T	K	A	L	A
Template Known Secondary structure																									G	G	G	G	G	G	G	G	S																	T		T	T
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870