Return to main results Retrieve Phyre Job Id

Job DescriptionP22707
Confidence7.22%DateThu Jan 5 11:39:03 GMT 2012
Rank31Aligned Residues40
% Identity25%Templatec4ktqA_
PDB info PDB header:transferase/dnaChain: A: PDB Molecule:protein (large fragment of dna polymerase i); PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140....... ..150.........160....
Predicted Secondary structure 







........







Query SS confidence 

























. . . . . . . .
















Query Sequence  RALKAITRSESYLCAMKAGACRYDTE. . . . . . . . GYVTEHISQEEEAYAAE
Query Conservation   

  

 
 


     

 
 

 ........
 
 
 

 
    
  
Alig confidence 



















...


........
















Template Conservation 



 

 
  
  

  
 ...


   
          
    
  

 
Template Sequence  RVLAHLSGDENLIRVFQEGR. . . DIHTETASWMFGVPREAVDPLMRRAAKT
Template Known Secondary structure 

TT
...
TT

STT
S
TT
Template Predicted Secondary structure 




...






Template SS confidence 


















































   617..620.........630...... ...640.........650.........660....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions