Return to main results Retrieve Phyre Job Id

Job DescriptionP22707
Confidence11.07%DateThu Jan 5 11:39:03 GMT 2012
Rank16Aligned Residues63
% Identity25%Templatec2kq6A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:polycystin-2; PDBTitle: the structure of the ef-hand domain of polycystin-2 suggests a2 mechanism for ca2+-dependent regulation of polycystin-2 channel3 activity
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.........160.........170
Predicted Secondary structure 





















Query SS confidence 



































































Query Sequence  VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEAYAAERLDKIR
Query Conservation 

          

   

 

  

 
 


     

 
 

 
 
 
 

 
    
  

    
Alig confidence 



































...









..
















Template Conservation 


  
  
   
 


 
  

  



 

 
 
... 


 



 ..


 




  


 

Template Sequence  DISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIF. . . TKYDQDGDQE. . LTEHEHQQMRDDLEKER
Template Known Secondary structure 
T

SS


TT

...
SSSSS
..

Template Predicted Secondary structure 










.....

Template SS confidence 



































































   5....10.........20.........30.........40 .........50 .........60.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions