Job Description P22707 Confidence 2.86% Date Thu Jan 5 11:39:03 GMT 2012 Rank 94 Aligned Residues 33 % Identity 9% Template c1obyB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	S	Y	L	C	A	M	K	A	G	A	C	R	Y	D	T	E	G	Y	V	T	E	H	I	S	Q	E	E	E	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	N	G	Q	N	V	I	G	L	K	D	S	Q	I	A	D
Template Known Secondary structure		T	S						T			S	S							T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions