Job Description P0A8E1 Confidence 99.54% Date Thu Jan 5 11:07:36 GMT 2012 Rank 137 Aligned Residues 174 % Identity 9% Template c3kdaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation Resolution 1.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.
Query Sequence		I	I	Y	L	H	G	F	D	S	N	S	P	G	N	H	E	K	V	L	Q	L	Q	F	I	D	P	D	V	R	L	I	S	Y	S	T	R	H	P	K	H	D	.	.	.	.	.	.	.	.	.	M	Q	H	L	L	K	E	V	D	K	M	L	Q	L	N	V	D	E	R	P	L	I	C	G	V	G	L	G	G	Y
Query Conservation																																											.	.	.	.	.	.	.	.	.
Alig confidence															.	.											.																.	.	.	.	.	.	.	.	.
Template Conservation															.	.											.
Template Sequence		V	M	L	V	H	G	F	G	Q	T	W	Y	E	.	.	W	H	Q	L	M	P	E	L	A	K	.	R	F	T	V	I	A	P	D	L	P	G	L	G	Q	S	E	P	P	K	T	G	Y	S	G	E	Q	V	A	V	Y	L	H	K	L	A	R	Q	F	S	P	D	R	P	F	D	L	V	A	H	D	I	G	I	W
Template Known Secondary structure								T	T			G	G	G	.	.	G	T	T						T	T	.	T	S								T	T	S	T	T					S	S		S	S																S	S	S	S								T
Template Predicted Secondary structure															.	.											.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	A	E	R	I	G	F	L	C	D	I	R	Q	V	I	F	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	Y	P	M	V	V	K	N	Q	A	D	I	A	R	L	V	Y	M	E	A	P	I	P	D	A	R	I	Y	R	F	P	A	F	T	A	Q	G	E	S	L	V	W	H	F	S	F	F	A	A	D	D	R	L	A	E	T	L	I	A	G	K	E	R	F	F	L	E	H	F	I	K	S	H	A	S	N	T	E	V
Template Known Secondary structure		T	T							T	G	G	G								S	S			S	S	G	G	G	G	G	S		S			T	T				S	S	T								S	T	T							T	T													T		S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
													91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	N	L	F	P	Y	E	N	M	E	G	K	I	D	R	P	E	E	Y	A	D	I	A	T	K	C	V	T	N	F	R	E	K	N	R	D	R	C	L	V	I	L	S	R	N	D	E	A	L	N	S	Q	R	T	S	E	E	L	H	H	Y	Y	.	.	E	I	V	W	D	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																														.	.
Template Conservation
Template Sequence		F	S	E	R	L	L	D	L	Y	A	R	S	Y	A	K	P	H	S	L	N	A	S	F	E	Y	Y	R	A	L	N	E	S	V	R	Q	N	A	E	L	A	K	T	R	L	Q	M	P	T	M	T	L	A	G	G	G	A	G	G	M	G	T	F	Q	L	E	Q	M	K	A	Y	A	E	D	V	E	G	H	V	L	P
Template Known Secondary structure		S													T	S													T												T	T	S		B		S									S	T	T			T	T								T	T	B	S	S							T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		158	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		E	Q	T	H	K	.	.	F	K	N	I	S	P	H	L	Q	R	I	K	A	F	K	T
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		G	C	G	H	W	L	P	E	E	C	A	A	P	M	N	R	L	V	I	D	F	L	S
Template Known Secondary structure		T			S						S													T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions