Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8E1
Confidence99.24%DateThu Jan 5 11:07:36 GMT 2012
Rank193Aligned Residues162
% Identity10%Templatec3d0kA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative poly(3-hydroxybutyrate) depolymerase lpqc; PDBTitle: crystal structure of the lpqc, poly(3-hydroxybutyrate) depolymerase2 from bordetella parapertussis
Resolution1.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50......
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Query Sequence  MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKH. . . . . . . . . . . . . . . . . . . . . . . . DMQHLLKEVDKMLQL
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Template Sequence  VVVVQHGVLRNGADY. RDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAA
Template Known Secondary structure 

TT

.TT


TTTS
TTTTT
B
TTS
B

GGGSTTT
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   53......60....... ..70.........80.........90.........100.........110.........120.........130.
 
   57..60 .........70.........80.........90....... ..100.........110.........120.........130...
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Query Sequence  NVDE. . RPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYEN. MEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSR
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Template Sequence  EIADCEQVYLFGHSAGGQFVHRLXSSQPHAPFHAVTAANPGWYTLPTFEHRFPEGLDGVGLTEDHLARLLAYPXTILAGD
Template Known Secondary structure  TS


SSTS
STT
SS
SS


SSTTSBTTTSSBTTT

S

T
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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   134..... 140.........150. ........160...
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Query Sequence  NDEALN. . . . . . . . . . . . . . . . . . . . . . SQRTSEELHHYY. . . . . EIVWDEEQTHKF
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Template Sequence  QDIATPNLPSEPAALRQGPHRYARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDG
Template Known Secondary structure  T





S

STT
SST




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   212.......220.........230.........240.........250.........260........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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