Job Description P0A8E1 Confidence 99.67% Date Thu Jan 5 11:07:36 GMT 2012 Rank 83 Aligned Residues 177 % Identity 16% Template c2zshA_ PDB info PDB header:hormone receptor Chain: A: PDB Molecule:probable gibberellin receptor gid1l1; PDBTitle: structural basis of gibberellin(ga3)-induced della2 recognition by the gibberellin receptor Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.				10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.
Predicted Secondary structure											.	.	.																			.																.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence											.	.	.																			.																.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		M	I	I	Y	L	H	G	F	D	.	.	.	S	N	S	P	G	N	H	E	K	V	L	Q	L	Q	F	I	D	P	.	D	V	R	L	I	S	Y	S	T	R	H	P	K	H	D	.	.	.	.	.	M	Q	H	L	L	K	E	V	D	K	M	L	Q	L	.	.	.	.	.	.	.	N	V	D	E	R	P	L	I
Query Conservation											.	.	.																			.																.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence											.	.	.																			.																.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	L	F	F	H	G	G	S	F	A	H	S	S	A	N	S	A	I	Y	D	T	L	C	R	R	L	V	G	L	C	K	C	V	V	V	S	V	N	Y	R	R	A	P	E	N	P	Y	P	C	A	Y	D	D	G	W	I	A	L	N	W	V	N	S	R	S	W	L	K	S	K	K	D	S	K	V	H	I	F	L
Template Known Secondary structure									S	T	T	T	S			T	T	B															T	S										T	T	T	S		T	T															T		G	G	G			T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.							.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	G	V	G	L	G	G	Y	W	A	E	R	I	G	F	L	C	D	I	.	.	.	.	.	.	R	Q	V	I	F	N	P	N	L	F	P	Y	E	N	M	E	G	K	I	D	R	P	E	E	Y	A	D	I	A	T	K	C	V	T	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	D	S	S	G	G	N	I	A	H	N	V	A	L	R	A	G	E	S	G	I	D	V	L	G	N	I	L	L	N	P	M	F	G	G	N	E	R	T	E	S	E	K	S	L	D	G	K	Y	F	V	T	V	R	D	R	D	W	Y	W	K	A	F	L	P	E	G	E	D	R	E	H	P	A	C	N	P	F	S
Template Known Secondary structure					T															T	T	T										S						S	S									T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																					.	.	.	.																										.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																					.	.	.	.																										.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	E	K	N	R	D	R	C	L	V	I	L	S	R	N	D	E	A	L	N	.	.	.	.	S	Q	R	T	S	E	E	L	H	H	Y	Y	E	I	V	W	D	E	E	Q	T	H	K	F	K	.	.	.	.	.	.	N	I	S	P	H	L	Q	R	I	K	A	F	K
Query Conservation		.	.	.	.	.	.																					.	.	.	.																										.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.	.	.	.																										.	.	.	.	.	.
Template Conservation
Template Sequence		P	R	G	K	S	L	E	G	V	S	F	P	K	S	L	V	V	V	A	G	L	D	L	I	R	D	W	Q	L	A	Y	A	E	G	L	K	K	A	G	Q	E	V	K	L	M	H	L	E	K	A	T	V	G	F	Y	L	L	P	N	N	N	H	F	H	N	V	M	D	E	I	S	A	F	V
Template Known Secondary structure		T	T	S				T	T												T	T	S	T	T														T	T									T	T			T	T	T	T	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions