Job Description P0A8E1 Confidence 99.90% Date Thu Jan 5 11:07:36 GMT 2012 Rank 2 Aligned Residues 170 % Identity 12% Template c2qs9A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:retinoblastoma-binding protein 9; PDBTitle: crystal structure of the human retinoblastoma-binding2 protein 9 (rbbp-9). nesg target hr2978 Resolution 1.72 Å

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		2	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																.														.
Query SS confidence													.	.																.														.
Query Sequence		I	I	Y	L	H	G	F	D	S	N	S	.	.	P	G	N	H	E	K	V	L	Q	L	Q	F	I	D	P	.	D	V	R	L	I	S	Y	S	T	R	H	P	K	.	H	D	M	Q	H	L	L	K	E	V	D	K	M	L	Q	L	N	V	D	E	R	P	L	I	C	G	V	G	L	G	G	Y	W	A	E	R	I
Query Conservation													.	.																.														.
Alig confidence													.	.																.														.															.	.
Template Conservation																																																											.	.
Template Sequence		A	V	I	V	P	G	N	G	G	G	D	V	T	T	H	G	W	Y	G	W	V	K	K	E	L	E	K	I	P	G	F	Q	C	L	A	K	N	X	P	D	P	I	T	A	R	E	S	I	W	L	P	F	X	E	T	E	L	.	.	H	C	D	E	K	T	I	I	I	G	H	S	S	G	A	I	A	A	X	R	Y
Template Known Secondary structure								S	S	S	S		T	T	T	S	T	T									T	T	S	T	T									S	S	T	T	T													T	S	.	.				T	T							T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		G	F	L	C	D	I	R	Q	V	I	F	N	P	N	L	F	P	Y	E	N	M	E	G	K	I	D	R	P	E	E	Y	A	D	I	A	T	K	C	V	T	N	F	R	E	K	N	R	D	R	C	L	V	I	L	S	R	N	D	E	A	L	N	S	Q	R	T	S	E	E	L	H	H	Y	.	Y	E	I	V	W	D
Query Conservation																																																																											.
Alig confidence																																							.	.	.	.																																	.
Template Conservation																																							.	.	.	.
Template Sequence		A	E	T	H	R	V	Y	A	I	V	L	V	S	A	Y	T	S	D	L	G	D	E	N	E	R	A	S	G	Y	F	T	R	P	W	Q	W	E	.	.	.	.	K	I	K	A	N	C	P	Y	I	V	Q	F	G	S	T	D	D	P	F	L	P	W	K	E	Q	Q	E	V	A	D	R	L	E	T	K	L	H	K	F
Template Known Secondary structure					S			S						S			S	S		T	T							T	S	T	T	S	S						.	.	.	.							S								T	T		S	S	S													T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		157	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	E	Q	T	H	.	K	F	K	N	I	S	P	H	L	Q	R	I	K	A	F	K
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		T	D	C	G	H	F	Q	N	T	E	F	H	E	L	I	T	V	V	K	S	L	L
Template Known Secondary structure		S	S		T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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