Job Description P0A8E1 Confidence 99.71% Date Thu Jan 5 11:07:36 GMT 2012 Rank 59 Aligned Residues 177 % Identity 14% Template c2bklB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:prolyl endopeptidase; PDBTitle: structural and mechanistic analysis of two prolyl2 endopeptidases: role of inter-domain dynamics in3 catalysis and specificity Resolution 1.5 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Query Sequence		M	I	I	Y	L	H	G	F	D	S	N	S	P	G	N	H	E	K	V	L	Q	L	Q	F	I	D	P	D	V	R	L	I	S	Y	S	T	R	H	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	M	Q	H	L	L	K	E	V	D	K	M	L	Q	L	.	.	N	V	D	E	R	P
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		T	L	L	Y	G	Y	G	G	F	N	V	N	M	E	A	N	F	R	S	S	I	L	P	W	L	D	A	G	G	V	Y	A	V	A	N	L	R	G	G	G	E	Y	G	K	A	W	H	D	A	G	R	L	D	K	K	Q	N	V	F	D	D	F	H	A	A	A	E	Y	L	V	Q	Q	K	Y	T	Q	P	K	R	L
Template Known Secondary structure										T	T									G	G	G						T	T									T	T	S	S	T	T							T	T	S	G	G	G	T																	T	T	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.												.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.
Predicted Secondary structure																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		L	I	C	G	V	G	L	G	G	Y	W	A	E	R	I	G	F	L	C	D	I	.	.	.	R	Q	V	I	F	N	P	N	L	F	P	Y	E	N	M	E	G	K	I	D	R	.	.	.	.	.	.	.	.	.	.	.	P	E	E	Y	A	D	I	A	T	K	C	V	T	N	F	R	E	K	N	R	D	.	.	R
Query Conservation																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																							.	.	.																						.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		A	I	Y	G	G	S	N	G	G	L	L	V	G	A	A	M	T	Q	R	P	E	L	Y	G	A	V	V	C	A	V	P	L	L	D	M	V	R	Y	H	L	F	G	S	G	R	T	W	I	P	E	Y	G	T	A	E	K	P	E	D	F	K	T	L	H	A	Y	S	P	Y	H	H	V	R	P	D	V	R	Y	P	A
Template Known Secondary structure							T														G	G	G		S						S					T	T	T	G	G	G	S	T	T	G	G	G	G							T	T	S												G	G	G				S	S
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		C	L	V	I	L	S	R	N	D	E	A	L	N	S	Q	R	T	S	E	E	L	H	H	Y	.	.	.	.	.	.	.	.	.	Y	E	I	V	W	D	E	E	Q	T	H	K	F	K	N	I	S	.	.	.	.	P	H	L	Q	R	I	K	A	F	K
Query Conservation																										.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		L	L	M	M	A	A	D	H	D	D	R	V	D	P	M	H	A	R	K	F	V	A	A	V	Q	N	S	P	G	N	P	A	T	A	L	L	R	I	E	A	N	A	G	H	G	G	A	D	Q	V	A	K	A	I	E	S	S	V	D	L	Y	S	F	L
Template Known Secondary structure								T	T		S	S	S		T												T	S	T	T			S								T	T		B	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions