 |
Job Description | P0AF08 | Confidence | 95.01% | Date | Thu Jan 5 11:24:49 GMT 2012 |
Rank | 153 | Aligned Residues | 108 |
% Identity | 21% | Template | d2vo1a1 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| Nitrogenase iron protein-like
|
Resolution | 2.8 |
|
 |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | N | I | I | A | V | S | S | G | K | G | G | V | G | K | S | S | T | A | V | N | L | A | L | A | L | A | A | E | G | A | K | V | G | I | L | D | A | D | I | Y | G | P | S | I | P | T | M | L | G | A | E | N | Q | R | P | T | S | P | D | G | T | H | M | A | P | I | M | S | H | G | L | A | T | N | S | I | G | Y |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
| . | . | . | . | . | . | . | . |
Template Sequence |   |
M | K | Y | I | L | V | T | G | G | V | I | S | G | I | G | K | G | I | I | A | S | S | V | G | T | I | L | K | S | C | G | L | H | V | T | S | I | K | I | D | P | Y | . |
. |
. |
. |
. |
. |
. |
I | N | I | D | N | N | L | T | T | G | K | I | Y | Q | Y | V | I | N | K | E | R | K | G | . |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| S | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| S | . | . | . | . | . | . | . | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
|
|
|
  |
  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | T | D | D | N | A | M | V | W | R | G | P | M | A | S | K | A | L | M | Q | M | L | Q | E | T | L | . |
. |
. |
. |
. |
. |
. |
W | P | D | L | D | Y | L | V | L | D | M | P | P | G | T | G | D | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|
|
|   |
|
|
|   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
. |
. |
D | Y | L | G | K | T | V | Q | V | V | P | H | I | T | D | A | I | Q | E | W | V | M | R | Q | A | L | I | P | V | D | E | D | G | L | E | P | Q | V | C | V | I | E | L | G | G | T | V | G | D | I |
Template Known Secondary structure |   |
. | . | T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S | S |
|
|
|
| S |  |  |  |  |  |  |
| S |
| T | T |
| G |
Template Predicted Secondary structure |   |
. | . |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|