Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence96.21%DateThu Jan 5 11:24:49 GMT 2012
Rank110Aligned Residues181
% Identity14%Templated1yrba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160.........170.........180........
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  IIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVT
Query Conservation   


 
 







 
 


  

  
  




 
     
    
                                
Alig confidence 























.
































............









Template Conservation   

 


  







  
    .        

 
                     ............          
Template Sequence  MIVVFVGTAGSGKTTLTGEFGRYL. EDNYKVAYVNLDTGVKELPYEPSIDVREFVTVE. . . . . . . . . . . . EIMREGYGPN
Template Known Secondary structure 

STTSS.TTTS


SS
S

SS

SGGGT

............TTT

Template Predicted Secondary structure 






.

















............



Template SS confidence 















































































   1........10.........20.... .....30.........40.........50....... ..60.......
 
   189190.........200.........210.........220.........230. ........240.........250. .......
Predicted Secondary structure 


















.....




.....
Query SS confidence 










































. . . . .



















. . . . .






Query Sequence  DDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQ. . . . . LTLAQNIPVTGAVVVTTPQD. . . . . IALIDAK
Query Conservation                     
        
 



 


     .....
    
  

 



  
  ..... 
     
Alig confidence 










































.....



















.....






Template Conservation                                      
                       
 
                 
Template Sequence  GAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRF
Template Known Secondary structure  TT
S

SSSTSSS

GGG

S
Template Predicted Secondary structure 


























Template SS confidence 















































































   68.70.........80.........90.........100.........110.........120.........130.........140.......
 
   259260.........270.........280.........290.........300...
Predicted Secondary structure 











Query SS confidence 












































Query Sequence  KGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAE
Query Conservation                 

 
                          
Alig confidence 













.





























Template Conservation               
. 
 

 
                       
Template Sequence  FALLIDLRLGATTI. PALNKVDLLSEEEKERHRKYFEDIDYLTAR
Template Known Secondary structure  TS
.

GGG


Template Predicted Secondary structure 



.






Template SS confidence 












































   148.150.........160. ........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions