Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence98.72%DateThu Jan 5 11:24:49 GMT 2012
Rank56Aligned Residues148
% Identity18%Templated1vmaa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  GVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIG
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Template Sequence  EPPFVIMVV. GVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLK. . . . . . . . . . . . . . . . . . . . . . . . . IWG
Template Known Secondary structure  SS
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TTSSTT


TT
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   90........ .100.........110.........120.........130.........140 ...
 
   185....190.........200.........210.........220.........230......... 240.........250...
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Query Sequence  YLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIP. . . . . . . . . . . VTGAVVVTTPQDIA
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Template Sequence  ERVGATVISHSEGADPAAVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTG
Template Known Secondary structure  T


STT

TT
S



S
GGGT
TT

SGGG
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   254.....260.........270.........280
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Query Sequence  LIDAKKGIVMFEKVEVPVLGIVENMSV
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Template Sequence  QNGLVQAKIFKEAVNVTG. . IILTKLD
Template Known Secondary structure  S


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GG
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   224.....230.........240. .......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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