Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence100.00%DateThu Jan 5 11:24:49 GMT 2012
Rank9Aligned Residues231
% Identity24%Templated1hyqa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  NIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLV
Query Conservation    


 
 







 
 


  

  
  




 
     
    
                               
Alig confidence 















































































Template Conservation 


 
 
 







 
  

  

  
  




 
                                       
  
Template Sequence  RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLAGEARIDEAIYVGPGGVKV
Template Known Secondary structure  SSS
S
TT




SSSSTT






TTSS
GGGG

GGG
Template Predicted Secondary structure 





































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   188.190.........200.........210.........220.........230.........240.........250.........260.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKV
Query Conservation                      
        
 



 


     
    
  

 



  
   
              
Alig confidence 







































..





































Template Conservation                                          ..       
   
 

 
                 
   
Template Sequence  VPAGVSLEGLRKANPEKLEDVLTQIMESTDILLLDAPAGL. . ERSAVIAIAAAQELLLVVNPEISSITDGLKTKIVAERL
Template Known Secondary structure 

S

T
S

SSS..SSS
SS
Template Predicted Secondary structure 

















..









Template SS confidence 















































































   83......90.........100.........110.........120.. .......130.........140.........150.........160
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  EVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLAD
Query Conservation        

 
                                
  

 
  
  
   
 
     
 
        

 
Alig confidence 
















..........




















































Template Conservation        

 
       ..........                  

    
  
   
  
    
 
        

 
Template Sequence  GTKVLGVVVNRITTLGI. . . . . . . . . . EMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVELAN
Template Known Secondary structure  T

TTT..........TTS


TS

TTS
Template Predicted Secondary structure 








..........















Template SS confidence 















































































   161........170....... ..180.........190.........200.........210.........220.........230
 
   348.350
Predicted Secondary structure 
Query SS confidence 


Query Sequence  RVA
Query Conservation   
 
Alig confidence 


Template Conservation   
 
Template Sequence  YIA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   231..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions