Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF08
Confidence95.50%DateThu Jan 5 11:24:49 GMT 2012
Rank130Aligned Residues33
% Identity27%Templated1gg4a4
SCOP infoRibokinase-like MurD-like peptide ligases, catalytic domain MurCDEF
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140.
Predicted Secondary structure 












Query SS confidence 



































Query Sequence  VKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGI
Query Conservation      


 
 







 
 


  

  
  


Alig confidence 











...




















Template Conservation 
  

 



 
...



   
  

   
     
Template Sequence  PARVVALTGSSG. . . KTSVKEXTAAILSQCGNTLYT
Template Known Secondary structure 


SS
...TTTS

Template Predicted Secondary structure 





...




Template SS confidence 



































   99100.........110 .........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions