Job Description P0AF08 Confidence 99.97% Date Thu Jan 5 11:24:49 GMT 2012 Rank 24 Aligned Residues 159 % Identity 18% Template c3pg5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein dip2308 from corynebacterium diphtheriae,2 northeast structural genomics consortium target cdr78 Resolution 3.30 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	D	G	T	H	M	A	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	R	T	I	S	F	F	N	N	K	G	G	V	G	K	T	T	L	S	T	N	V	A	H	Y	F	A	L	Q	G	K	R	V	L	Y	V	D	C	D	P	Q	C	N	A	T	Q	L	X	L	T	E	E	Q	T	E	S	I	Y	L	D	E	V	A	E	R	N	S	L	A	K	T	V	Y	A	I	F	V	P	L	R
Template Known Secondary structure							B			S	S																			T	T										T	T		T	T					S													G	G	G	G	G					S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																	174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.													.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	H	G	L	A	T	N	S	I	G	Y	L	V	T	D	D	N	A	M	.	.	.	.	.	.	.	.	.	.	.	.	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	E	S	Q	I	A	A	E	I	T	P	X	R	S	E	R	F	G	V	D	V	L	P	G	H	P	A	L	S	Q	I	E	D	L	X	S	D	S	W	Q	S	A	L	G	R	Q	T	G	P	F	R	R	I	H	W	A	G	Q	L	A	H	A	X	E	R	D	D	R	Y	D	V	I	F	F	D	V	G	P	S
Template Known Secondary structure		T	T		S	S								B			T	T	T	T	S							G	G	G	G	T														T	T						T	T	T	T												T	T			S								S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	D	I	Q	L	T	L	A	Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q	D	I	A	L	I	D	A	K	K	G	I	V	M	F	E	K	V
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		L	G	.	.	P	F	N	R	T	V	L	L	G	C	D	A	F	V	T	P	T	A	T	D	L	F	S	F	H	A	F	G	N	L	A	R	W	F	D	A	W
Template Known Secondary structure			S	.	.								T	T		S									S
Template Predicted Secondary structure				.	.
Template SS confidence
		165	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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