Job Description P0AF08 Confidence 95.26% Date Thu Jan 5 11:24:49 GMT 2012 Rank 142 Aligned Residues 113 % Identity 24% Template c3nxsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lao/ao transport system atpase; PDBTitle: crystal structure of lao/ao transport system from mycobacterium2 smegmatis bound to gdp Resolution 2.30 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	K	N	I	I	A	V	S	S	G	K	G	G	V	G	K	S	S	T	A	V	N	L	A	L	A	L	A	A	E	G	A	K	V	G	I	L	D	A	D	I	Y	G	P	S	I	P	T	M	L	G	A	E	N	Q	R	P	T	S	P	D	G	T	H	M	A	P	I	M	S	H	G	L	A	T	N	S	I
Query Conservation
Alig confidence												.																																		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation												.																																		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence		A	G	S	A	M	H	V	G	I	T	.	G	V	P	G	V	G	K	S	T	T	I	E	A	L	G	M	H	L	I	E	A	G	H	R	V	A	V	L	A	V	D	R	M	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	A	V	H	P	D	A	Y	I	R	P	S	P	T	S	G	T	L	.	.	.	.
Template Known Secondary structure		T	T		S							.			T	T	S																T	T												.	.	.	.	.	.	.	.	.	.	.	.							T	T										S			.	.	.	.
Template Predicted Secondary structure												.																																		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	L	V	T	D	D	N	A	M	V	W	R	G	P	M	A	S	K	A	L	M	Q	M	L	Q	E	T	L	W	P	D	L	D	Y	L	V	L	D	M	P	P	G	T	G	D	I	Q	L	T	L	A	Q	N	I	P	V	T	G	A	V	V	V	T	T	P	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	A	K	A	T	R	E	T	I	V	L	L	E	A	A	G	Y	D	V	I	L	V	E	T	.	.	.	V	G	V	G	Q	S	E	V	T	V	A	G	M	V	D	T	F	V	F	L	T	L	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T									.	.	.				T	T							T	T		S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
																129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions